Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0367
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.33 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.00 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 295 CPSRFKYEGACEDGAPE 345
           CP R K+EG  E+G+PE
Sbjct: 8   CPKRMKWEGG-EEGSPE 23


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 22/80 (27%), Positives = 32/80 (40%)
 Frame = -1

Query: 617 GSSFGTNRKNSCAPWYHLTVYNVSPVSSAHRQPRIALEPTPTASGTLSWMSRRPSTLPPS 438
           G SFGTN    CA W  +T   +  +  A+       E    A     W++  P T+P S
Sbjct: 275 GVSFGTNLVILCALW--ITTLLLFTILLAYGCAGATSEAEKIAKICFYWLNEIP-TMPVS 331

Query: 437 QSKRAASLEVIL*VVEVRSR 378
              +    E+ L   +  SR
Sbjct: 332 IKDQTIKEELALLAQQSTSR 351


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 367 CHDRFVTALVRHPHKLLH 314
           CH +F  ALV   H  LH
Sbjct: 200 CHKKFTNALVLQQHIRLH 217


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 506 PVRSSAADGRWIQEKRCIRLNGTT 577
           PV+++   G+W+ EK       TT
Sbjct: 426 PVQTTPKPGQWVPEKSTSTTQRTT 449


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 495 GRGFQCDPRLPMGAGYRRNVVYG 563
           GR   CD R+   AGY    V G
Sbjct: 260 GRIIGCDQRISFIAGYMTEEVSG 282


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 522 LPMGAGYRRNVVYG*MVPRSTGVLPIR 602
           +P G G R  +    +VP    V+PI+
Sbjct: 415 MPFGVGPRNCIAKFDIVPNGKTVIPIK 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,598
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)