Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0367
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   3.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.9  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   8.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 495 GRGFQCDPRLPMGAGYRRNVVYG 563
           GR  QCD R+ + AGY  + V G
Sbjct: 529 GRIVQCDQRISIVAGYLTDEVSG 551


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 395 VEVRSRPHVMSRPLRDGSGAPSSQAPSYLN 306
           V V   P V  + L DGS A  S  PS+LN
Sbjct: 328 VPVPDLPKVQ-KALSDGSAAVGSTIPSFLN 356


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 272 LYKDPHRNILCLFSFKCR-RNLCRLLNVQSVQ 180
           L++DPHRNI        R RN C +   + +Q
Sbjct: 335 LHQDPHRNIFWWSPLLARLRNNCEVARDRMLQ 366


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 220 LHLNEKRHKMFRCGSL*RPACERTICPSRFKYE 318
           LH+ EK    +  G L +  CE    PS  K E
Sbjct: 118 LHIKEKYDNNWWIGRLVKEGCEVGFIPSPVKLE 150


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -3

Query: 141 CMR-IKSKPVYNNKWHNVQITEHIVFVDYGVAKTCRRLRRATDWQAFR 1
           C R ++ + V      N     H++  ++  AK  + +   T WQ FR
Sbjct: 6   CTRSVRWRNVQAQAQRNTATAXHVIDPEWASAKPYKSIPGPTLWQLFR 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,075
Number of Sequences: 2352
Number of extensions: 16560
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)