Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0366
(507 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 2.1
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 22 3.6
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 4.8
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 8.4
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 8.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.4
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 8.4
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 8.4
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 133 HHGLKLSLAPLAVLHSRPCCY 71
H G+ + P+ VLH P C+
Sbjct: 181 HMGVHRAKPPMRVLHQCPVCH 201
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 49 PTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHE 156
P N I+SGN + + + + + K G L + +++
Sbjct: 43 PVNDIISGNILPLYTSAENIFKQLREWGRLYYPIYK 78
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.4 bits (43), Expect = 4.8
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 258 FVAQSLNKFLVCG 220
F+ + NKF++CG
Sbjct: 317 FLQEGANKFVICG 329
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 20.6 bits (41), Expect = 8.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -3
Query: 82 PCCYPTRWG 56
PCC PT+ G
Sbjct: 335 PCCVPTQLG 343
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 8 SNSQQPWLMLKSRSPPTPSCRVTT 79
S P+ +L R+PP P VT+
Sbjct: 337 STGFSPYEILYGRTPPNPLDAVTS 360
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.6 bits (41), Expect = 8.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -3
Query: 76 CYPTRWGWW 50
CY T W W+
Sbjct: 1402 CYFTNWAWY 1410
Score = 20.6 bits (41), Expect = 8.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -3
Query: 76 CYPTRWGWW 50
CY T W W+
Sbjct: 1827 CYFTNWAWY 1835
Score = 20.6 bits (41), Expect = 8.4
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -3
Query: 76 CYPTRWGWW 50
CY T W W+
Sbjct: 2325 CYFTNWAWY 2333
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 375 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 283
+ +G+ N CL I V + + + FV+V
Sbjct: 52 EESGSMANQKCLEITVKILKIVAYLVTFVIV 82
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 375 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 283
+ +G+ N CL I V + + + FV+V
Sbjct: 52 EESGSMANQKCLEITVKILKIVAYLVTFVIV 82
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 375 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 283
+ +G+ N CL I V + + + FV+V
Sbjct: 52 EESGSMANQKCLEITVKILKIVAYLVTFVIV 82
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 375 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 283
+ +G+ N CL I V + + + FV+V
Sbjct: 52 EESGSMANQKCLEITVKILKIVAYLVTFVIV 82
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 20.6 bits (41), Expect = 8.4
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -3
Query: 217 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 104
HHS P H V A+ E + G +L +P
Sbjct: 52 HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 20.6 bits (41), Expect = 8.4
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = -3
Query: 217 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 104
HHS P H V A+ E + G +L +P
Sbjct: 52 HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,710
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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