Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0365
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 508 VRRGNEKGSGLLERLRSRTAHQAGAHDCTVD 600
           ++R  E   GL++R++SR       HD  VD
Sbjct: 544 LKRRTEIYKGLIDRIKSREKLTMKFHDGEVD 574


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 687 HEVPAPGCHSADVRSPGPAARMEARIPLPIHS 592
           +  P P  H+  + S  P  R E ++   +HS
Sbjct: 212 YRAPRPWIHNETIYSLTPQGRKEQKVLKSLHS 243


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 602 GNGMRASIRAAGPGERTSAE*QPG 673
           GN     + +AGPGE      QPG
Sbjct: 879 GNNHDQGVPSAGPGEAGEYTKQPG 902


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,889
Number of Sequences: 336
Number of extensions: 4076
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)