BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0365
(722 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p pro... 268 4e-72
AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation i... 268 4e-72
AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,... 268 4e-72
AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,... 268 4e-72
AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,... 268 4e-72
AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,... 268 4e-72
AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,... 268 4e-72
AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,... 268 4e-72
AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,... 268 4e-72
AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize iso... 35 0.13
AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize iso... 35 0.13
AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-P... 35 0.13
AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-P... 35 0.13
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. 31 1.6
M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p... 31 1.6
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. 31 1.6
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro... 31 1.6
AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p pro... 31 1.6
AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ... 31 1.6
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P... 31 1.6
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P... 31 1.6
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P... 31 1.6
AE013599-3313|AAF46788.1| 404|Drosophila melanogaster CG13500-P... 31 2.1
AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein. 29 4.8
AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA... 29 4.8
>AY058505-1|AAL13734.1| 422|Drosophila melanogaster LD21309p
protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AF325529-1|AAK01218.1| 422|Drosophila melanogaster elongation
initiation factor 5C protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-297|AAN13249.1| 422|Drosophila melanogaster CG2922-PG,
isoform G protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-296|AAN13248.1| 422|Drosophila melanogaster CG2922-PF,
isoform F protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-295|AAN13247.1| 422|Drosophila melanogaster CG2922-PE,
isoform E protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-294|AAN13246.1| 422|Drosophila melanogaster CG2922-PD,
isoform D protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-293|AAF51995.1| 422|Drosophila melanogaster CG2922-PC,
isoform C protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-292|AAG22214.1| 422|Drosophila melanogaster CG2922-PB,
isoform B protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AE014297-291|AAF51996.1| 422|Drosophila melanogaster CG2922-PA,
isoform A protein.
Length = 422
Score = 268 bits (658), Expect = 4e-72
Identities = 122/162 (75%), Positives = 143/162 (88%)
Frame = +2
Query: 125 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKL 304
MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+ GDL+ KYLDSAG+KL
Sbjct: 1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60
Query: 305 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMR 484
DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+ CIF A E M++MRN EQVFVKL+R
Sbjct: 61 DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIR 120
Query: 485 RYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTALWIGNG 610
RYKYLEKMFEEEM KVL+++KGF P +RIKLARMTALW+ NG
Sbjct: 121 RYKYLEKMFEEEMGKVLLFVKGFTPSERIKLARMTALWLVNG 162
>AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize
isoform 3 protein.
Length = 1517
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 675 APGCHSADVRSPGPAARMEARIPLPIHSAVMRASLMRCSGSKPFK*TRTFFISSSNIFSK 496
AP C +SP PA + P+HS + A + + S S T N+
Sbjct: 444 APDCEPP--KSPTPALEQISEDREPVHSQISLARMDQPSTSAAAAVASTLSSQLKNLALP 501
Query: 495 YLYRRISFTNTCS-KFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMT-S 322
L R+ SF N S + + +S + + + L++ + + ++P ++ P+ + N T S
Sbjct: 502 NLVRKDSFNNWSSDEETNLMMSKMRQFFKNLIVATANAQQSKPSTPNQGPSTTNVNTTPS 561
Query: 321 P*RR*SSFDPAESRY 277
RR + PA+ Y
Sbjct: 562 SQRRLAKSRPAQLAY 576
>AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize isoform
2 protein.
Length = 2645
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 675 APGCHSADVRSPGPAARMEARIPLPIHSAVMRASLMRCSGSKPFK*TRTFFISSSNIFSK 496
AP C +SP PA + P+HS + A + + S S T N+
Sbjct: 1572 APDCEPP--KSPTPALEQISEDREPVHSQISLARMDQPSTSAAAAVASTLSSQLKNLALP 1629
Query: 495 YLYRRISFTNTCS-KFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMT-S 322
L R+ SF N S + + +S + + + L++ + + ++P ++ P+ + N T S
Sbjct: 1630 NLVRKDSFNNWSSDEETNLMMSKMRQFFKNLIVATANAQQSKPSTPNQGPSTTNVNTTPS 1689
Query: 321 P*RR*SSFDPAESRY 277
RR + PA+ Y
Sbjct: 1690 SQRRLAKSRPAQLAY 1704
>AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-PD,
isoform D protein.
Length = 1517
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 675 APGCHSADVRSPGPAARMEARIPLPIHSAVMRASLMRCSGSKPFK*TRTFFISSSNIFSK 496
AP C +SP PA + P+HS + A + + S S T N+
Sbjct: 444 APDCEPP--KSPTPALEQISEDREPVHSQISLARMDQPSTSAAAAVASTLSSQLKNLALP 501
Query: 495 YLYRRISFTNTCS-KFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMT-S 322
L R+ SF N S + + +S + + + L++ + + ++P ++ P+ + N T S
Sbjct: 502 NLVRKDSFNNWSSDEETNLMMSKMRQFFKNLIVATANAQQSKPSTPNQGPSTTNVNTTPS 561
Query: 321 P*RR*SSFDPAESRY 277
RR + PA+ Y
Sbjct: 562 SQRRLAKSRPAQLAY 576
>AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-PC,
isoform C protein.
Length = 2645
Score = 34.7 bits (76), Expect = 0.13
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 675 APGCHSADVRSPGPAARMEARIPLPIHSAVMRASLMRCSGSKPFK*TRTFFISSSNIFSK 496
AP C +SP PA + P+HS + A + + S S T N+
Sbjct: 1572 APDCEPP--KSPTPALEQISEDREPVHSQISLARMDQPSTSAAAAVASTLSSQLKNLALP 1629
Query: 495 YLYRRISFTNTCS-KFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMT-S 322
L R+ SF N S + + +S + + + L++ + + ++P ++ P+ + N T S
Sbjct: 1630 NLVRKDSFNNWSSDEETNLMMSKMRQFFKNLIVATANAQQSKPSTPNQGPSTTNVNTTPS 1689
Query: 321 P*RR*SSFDPAESRY 277
RR + PA+ Y
Sbjct: 1690 SQRRLAKSRPAQLAY 1704
>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein
protein.
Length = 1407
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGSAGHTAL 808
>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p
protein.
Length = 1374
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p
protein.
Length = 598
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 6 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 36
>AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain
transcription factorProspero protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
isoform D protein.
Length = 1374
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
isoform C protein.
Length = 1403
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
isoform A protein.
Length = 1535
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 284 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSL 192
+ T R H PAP +P R G +GHT+L
Sbjct: 778 VATAAPRPQMHHPAPARLPTRMGGAAGHTAL 808
>AE013599-3313|AAF46788.1| 404|Drosophila melanogaster CG13500-PA
protein.
Length = 404
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 106 ETDAFNNSIQRCCFTTR*PVHLAVTQQRTRIFRI 5
+TD+F S++R CF R V VT R +FRI
Sbjct: 334 DTDSFGQSVRRSCFQRRLLVLGLVTPNRRLLFRI 367
>AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.
Length = 1133
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 455 FEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTAL 595
F Q K KYLE FEE++ K L +G P+ + + AL
Sbjct: 1044 FYQEDTKTYSNAKYLENFFEEQLAKWLPQFEGTKPQGKRNTSNSPAL 1090
>AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA
protein.
Length = 1133
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 455 FEQVFVKLMRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIKLARMTAL 595
F Q K KYLE FEE++ K L +G P+ + + AL
Sbjct: 1044 FYQEDTKTYSNAKYLENFFEEQLAKWLPQFEGTKPQGKRNTSNSPAL 1090
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,313,097
Number of Sequences: 53049
Number of extensions: 846353
Number of successful extensions: 3127
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3119
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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