Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0362
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.0  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.9  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   7.9  

>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 173 EKKQTKDSETLRGTLQKTDDSCVNFVEGTG 262
           +KKQTK ++ ++    KT + C     GTG
Sbjct: 185 QKKQTKQNKKIQIKHTKTKNGCCRKTCGTG 214


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +1

Query: 253  RHRRLRFLVDQLREVECATAEAVHPDGRQHDHAQAPQRAAVSALYLHLRGSV 408
            R  R  FL+  +   + A  E     G   DH +  +    SA+++H   S+
Sbjct: 1825 RSERQSFLITTIPITQQAAHEPGLDHGPAEDHVEEEEDGTRSAIHMHAAHSL 1876


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 188 KDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLNA 304
           +D E +   L+  D+    FV+  G Y F +    +L A
Sbjct: 2   EDVELISAGLEDDDEGGCYFVDQKGNYYFQANEDAELTA 40


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 61  HGGYDIADHGHT 96
           H GYD AD  HT
Sbjct: 195 HAGYDAADTAHT 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,842
Number of Sequences: 2352
Number of extensions: 10229
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)