Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0362
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08850.2 68417.m01455 leucine-rich repeat family protein / pr... 32 0.35
At5g38360.1 68418.m04630 esterase/lipase/thioesterase family pro... 29 1.9
At3g05820.1 68416.m00653 beta-fructofuranosidase, putative / inv... 29 1.9
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 29 2.5
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 29 2.5
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 29 2.5
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 29 3.3
At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly ident... 28 4.3
At3g58110.1 68416.m06480 expressed protein 28 5.7
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to... 28 5.7
At2g42370.1 68415.m05243 expressed protein 28 5.7
At4g08850.1 68417.m01454 leucine-rich repeat family protein / pr... 27 7.5
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 27 10.0
>At4g08850.2 68417.m01455 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1009
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 161 VLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYVFSSTNFEKLN 301
+LLGE + K S+ L K D S + V GT GYV T F+ L+
Sbjct: 911 ILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPGTLFDPLD 957
>At5g38360.1 68418.m04630 esterase/lipase/thioesterase family
protein low similarity to SP|P49323 Non-heme
chloroperoxidase (EC 1.11.1.10) (Chloride peroxidase)
{Streptomyces lividans}; contains Interpro entry
IPR000379
Length = 242
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 140 GFSEHSVVLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGG 265
GF ++V LLG+ + + T+ GTLQ +F+E G
Sbjct: 94 GFDSYAVSLLGQGESDEPLGTVAGTLQTHASDIADFIESNLG 135
>At3g05820.1 68416.m00653 beta-fructofuranosidase, putative /
invertase, putative / saccharase, putative /
beta-fructosidase, putative similar to neutral invertase
[Daucus carota] GI:4200165; contains Pfam profile
PF04853: Plant neutral invertase
Length = 633
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 231 SSVFWSVPLKVSESLVCFFSPSSTTECS 148
SS+FW L++ ES VC + S +CS
Sbjct: 596 SSLFWEEDLELLESCVCVLTKSGRKKCS 623
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 290 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 433
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 756 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 801
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 290 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 433
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 755 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 800
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 290 EKLNAPQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 433
++L QQ+QF+ + H+L S+QL QL T + F S C N
Sbjct: 756 QRLQQQQQQQFLSPQSQLPHHQLQSQQLQQLPTLSQGHQF--PSSCTN 801
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 19 RRNRVSHLRCDLQEHGGYDIADHGHTRPQDWRWKEFESSRW 141
RRN +SHL +LQ H G D G + W E + + W
Sbjct: 28 RRNFLSHLHKELQ-HNGIDAFKDGGIKRSRSIWPELKQAIW 67
>At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly
identical to ania-6a type cyclin [Arabidopsis thaliana]
GI:13924511
Length = 416
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 56 KNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSETLRG 211
K+ VTT AT K G N +VG S + +G++++ D E RG
Sbjct: 297 KDGMVTTPHEKATDSKKSGTESNSQPIVGDSSYERSKVGDRERESDREKERG 348
>At3g58110.1 68416.m06480 expressed protein
Length = 784
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 248 VEGTGGYVFSSTNFEKLNAPQQKQ 319
V+G+GG V S+T EKL Q+++
Sbjct: 687 VKGSGGLVLSTTEIEKLRLKQEEE 710
>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 402
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 5 RCFLLDAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGE 175
+CFL+D +++ D+I +M V ++ITA G G ++ VG S + V GE
Sbjct: 297 KCFLVDV--NSVCDMIPVDM-VANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGE 350
>At2g42370.1 68415.m05243 expressed protein
Length = 715
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 248 VEGTGGYVFSSTNFEKLNAPQQKQ 319
V+GTGG V S+ EKL ++K+
Sbjct: 624 VKGTGGLVLSTAEIEKLRLKEEKE 647
>At4g08850.1 68417.m01454 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1045
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 161 VLLGEKKQTKDSETLRGTLQKTDDSCVNFVEGTGGYV 271
+LLGE + K S+ L K D S + V GT GYV
Sbjct: 911 ILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYV 947
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 27.1 bits (57), Expect = 10.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 482 LHDAPTSACAKRLSYPCLRRQSEP 411
+H+ P C ++ PCLR + +P
Sbjct: 676 IHEPPPPGCESNINMPCLRYKYQP 699
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,114,366
Number of Sequences: 28952
Number of extensions: 201276
Number of successful extensions: 530
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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