Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0360
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   145   1e-36
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    27   0.59 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.2  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.6  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  145 bits (352), Expect = 1e-36
 Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
 Frame = +2

Query: 176 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 355
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+  AQT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 356 GSGKTLAYILPAIVHI-NNQPPIR-RCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 529
           GSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + ++ 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKV 280

Query: 530 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 709
              +GG   + Q + +  G  +++ATPGRL+DF+++G    +   ++VLDEADRMLDMGF
Sbjct: 281 CVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGF 340

Query: 710 EPQI 721
            P I
Sbjct: 341 LPSI 344


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 311 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDG 436
           P+A + K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 451 PVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 617 LIDFLEKGTTNLQRCTYLVLDEADR 691
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 128 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 220
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 539 THTCYEHKMCVQNLQQLAEFVVLTL 465
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 539 THTCYEHKMCVQNLQQLAEFVVLTL 465
           ++ C EH++CV  + Q   F  +TL
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTL 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,760
Number of Sequences: 2352
Number of extensions: 18106
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)