Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0360
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 257 7e-69
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 201 4e-52
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 199 1e-51
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 196 2e-50
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 167 5e-42
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 167 5e-42
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 167 5e-42
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 164 5e-41
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 158 4e-39
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 152 3e-37
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 123 1e-28
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 123 1e-28
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 123 1e-28
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 123 1e-28
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 123 1e-28
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 118 4e-27
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 118 4e-27
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 118 4e-27
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 116 2e-26
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 116 2e-26
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 113 1e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 113 1e-25
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 110 9e-25
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 109 3e-24
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 105 2e-23
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 105 2e-23
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 104 7e-23
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 103 2e-22
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 101 5e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 96 2e-20
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 96 2e-20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 94 8e-20
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 92 4e-19
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 90 2e-18
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 84 8e-17
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 84 8e-17
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 79 3e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 72 5e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 72 5e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 58 6e-09
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 54 1e-07
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 51 1e-06
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 41 8e-04
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.001
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 36 0.039
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 36 0.039
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.16
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.1
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.1
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.4
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.4
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.4
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 257 bits (629), Expect = 7e-69
Identities = 118/222 (53%), Positives = 166/222 (74%)
Frame = +2
Query: 56 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 235
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 236 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 415
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 416 PIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEI 595
+R +GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDLERGV+I
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDI 255
Query: 596 VIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
V+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLDMGFEPQI
Sbjct: 256 VVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQI 297
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 201 bits (491), Expect = 4e-52
Identities = 93/219 (42%), Positives = 139/219 (63%), Gaps = 1/219 (0%)
Frame = +2
Query: 68 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 247
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 248 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 427
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 428 CDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-RGVEIVIA 604
+GP+A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+ G E+V+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC 395
Query: 605 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
TPGR+ID ++ G TN R T+LV DEADRM DMGFE Q+
Sbjct: 396 TPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQV 434
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 199 bits (486), Expect = 1e-51
Identities = 94/191 (49%), Positives = 129/191 (67%), Gaps = 4/191 (2%)
Frame = +2
Query: 161 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 340
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 341 GVAQTGSGKTLAYILPAIVHINNQPPIRRCD----GPIALVLAPTRELAQQIQQVAADFG 508
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 509 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 688
++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDEAD
Sbjct: 403 KLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEAD 462
Query: 689 RMLDMGFEPQI 721
RMLDMGFEP +
Sbjct: 463 RMLDMGFEPDV 473
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 196 bits (477), Expect = 2e-50
Identities = 101/226 (44%), Positives = 140/226 (61%), Gaps = 4/226 (1%)
Frame = +2
Query: 56 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 232
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 233 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 412
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 413 PPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 592
P + DGPIA++LAPTRELA Q + A F ++ C +GG EQ DL+RG E
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAE 429
Query: 593 IVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQI 721
IV+ TPGR+ID L + TNL+R TYLVLDEADRM D GFEPQI
Sbjct: 430 IVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQI 475
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 167 bits (407), Expect = 5e-42
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 11/200 (5%)
Frame = +2
Query: 155 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 334
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 335 LVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRCDGPIALVLAPTRELAQQI 484
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 485 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 661
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 239 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 298
Query: 662 TYLVLDEADRMLDMGFEPQI 721
YLVLDEADRMLDMGFEPQI
Sbjct: 299 RYLVLDEADRMLDMGFEPQI 318
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 167 bits (407), Expect = 5e-42
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 11/200 (5%)
Frame = +2
Query: 155 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 334
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 335 LVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRCDGPIALVLAPTRELAQQI 484
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 485 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 661
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 223 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 282
Query: 662 TYLVLDEADRMLDMGFEPQI 721
YLVLDEADRMLDMGFEPQI
Sbjct: 283 RYLVLDEADRMLDMGFEPQI 302
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 167 bits (407), Expect = 5e-42
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 11/200 (5%)
Frame = +2
Query: 155 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 334
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 335 LVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRCDGPIALVLAPTRELAQQI 484
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 485 QQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 661
+ A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C
Sbjct: 220 HKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC 279
Query: 662 TYLVLDEADRMLDMGFEPQI 721
YLVLDEADRMLDMGFEPQI
Sbjct: 280 RYLVLDEADRMLDMGFEPQI 299
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 164 bits (399), Expect = 5e-41
Identities = 86/185 (46%), Positives = 121/185 (65%), Gaps = 7/185 (3%)
Frame = +2
Query: 188 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 364
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 365 KTLAYILPAIVHINNQ-PPIRRCD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVR 526
KTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 527 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 706
+ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDEADRMLDMG
Sbjct: 193 SVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMG 252
Query: 707 FEPQI 721
FE I
Sbjct: 253 FEVAI 257
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 158 bits (383), Expect = 4e-39
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 11/213 (5%)
Frame = +2
Query: 116 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 292
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 293 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRCDGPIALVLAPT 463
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 464 RELAQQIQQVAADF-------GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 622
RELA+QI + + G C+ GG P EQA+D+ G+ IV+ATPGRL
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVVATPGRLS 334
Query: 623 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
D L K NL+ C YLVLDEADRMLDMGFE +I
Sbjct: 335 DMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 152 bits (368), Expect = 3e-37
Identities = 79/193 (40%), Positives = 115/193 (59%), Gaps = 12/193 (6%)
Frame = +2
Query: 179 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 358
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 359 SGKTLAYILPAIVHINNQPPI-----------RRCDGPIALVLAPTRELAQQIQQVAADF 505
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 506 GHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 682
+ + + + ++GG ++Q L G I+IATPGRLID +++G ++ C YLVLDE
Sbjct: 274 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDE 333
Query: 683 ADRMLDMGFEPQI 721
ADRMLDMGFEPQI
Sbjct: 334 ADRMLDMGFEPQI 346
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 209 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 389 AIVHINNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 556
+ + + + +G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 557 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 514
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 209 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 389 AIVHINNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 556
+ + + + +G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 557 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 514
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 123 bits (297), Expect = 1e-28
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 209 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 389 AIVHINNQPPIRR-CDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 556
+ + + + +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 557 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I
Sbjct: 416 GYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEI 471
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 123 bits (297), Expect = 1e-28
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 209 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 389 AIVHINNQPPIRR-CDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 556
+ + + + +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 557 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I
Sbjct: 416 GYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEI 471
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 123 bits (297), Expect = 1e-28
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 209 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 389 AIVHINNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 556
+ + + + +G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 557 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 459 GYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 514
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 118 bits (284), Expect = 4e-27
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 401 INNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 568
+ ++ + +G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 569 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 725
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 118 bits (284), Expect = 4e-27
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 401 INNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 568
+ ++ + +G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 569 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 725
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 118 bits (284), Expect = 4e-27
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 5/172 (2%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 401 INNQPPIRRC-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 568
+ ++ + +G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 569 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDI 725
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 116 bits (279), Expect = 2e-26
Identities = 59/173 (34%), Positives = 98/173 (56%)
Frame = +2
Query: 203 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 382
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 383 LPAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 562
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 563 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
Q + +I++ATPGRL+ + + L Y+V DEADR+ +MGF+ Q+
Sbjct: 136 QFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQL 188
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 116 bits (279), Expect = 2e-26
Identities = 59/173 (34%), Positives = 98/173 (56%)
Frame = +2
Query: 203 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 382
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 383 LPAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 562
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 563 QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
Q + +I++ATPGRL+ + + L Y+V DEADR+ +MGF+ Q+
Sbjct: 136 QFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQL 188
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 113 bits (272), Expect = 1e-25
Identities = 59/170 (34%), Positives = 97/170 (57%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 391
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 392 IVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 571
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 572 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQI 192
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 113 bits (272), Expect = 1e-25
Identities = 59/170 (34%), Positives = 97/170 (57%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 391
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 392 IVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 571
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 572 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI
Sbjct: 143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQI 192
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 110 bits (265), Expect = 9e-25
Identities = 56/152 (36%), Positives = 89/152 (58%)
Frame = +2
Query: 257 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDG 436
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 437 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 616
A+V+ PTRELA Q Q+ + ++ GG R+ L V +VIATPGR
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGR 171
Query: 617 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 712
++D +EKG ++ C LVLDEAD++L F+
Sbjct: 172 ILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQ 203
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 109 bits (261), Expect = 3e-24
Identities = 65/169 (38%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
+ + P C LVL PTRELA QI Q G + + GG QA L
Sbjct: 106 LLDHPQAFFC-----LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 581 RGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M FE ++
Sbjct: 161 RRPHIIVATPGRLVDHLENTKG-FNLKALKFLIMDEADRILNMDFEVEL 208
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 105 bits (253), Expect = 2e-23
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 581 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQI 721
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q+
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQL 256
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 105 bits (253), Expect = 2e-23
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 581 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQI 721
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q+
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQL 256
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 104 bits (249), Expect = 7e-23
Identities = 58/154 (37%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Frame = +2
Query: 254 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCD 433
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 434 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 613
G ++++PTREL+ Q V ++ S + V GG+ + + L +GV I++ATPG
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPG 199
Query: 614 RLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFE 712
RL+D L+ L R L++DEADR+LD+GFE
Sbjct: 200 RLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFE 233
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 103 bits (246), Expect = 2e-22
Identities = 56/172 (32%), Positives = 93/172 (54%)
Frame = +2
Query: 206 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 385
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 386 PAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 565
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGED 137
Query: 566 ARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
R L+ G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+
Sbjct: 138 IRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQL 189
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 101 bits (242), Expect = 5e-22
Identities = 55/170 (32%), Positives = 92/170 (54%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 391
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 392 IVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 571
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIR 139
Query: 572 DLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
L+ G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+
Sbjct: 140 KLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQL 189
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 96.3 bits (229), Expect = 2e-20
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +2
Query: 158 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 337
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 338 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRCDGPIALVLAPTRELAQQIQQVAAD 502
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 503 FGHTSYVRNTCVFGGAPKREQARDLE--RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 676
+ + ++ FGG + + L + I++AT GRL DF+ G +L + Y+VL
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 677 DEADRMLD 700
DEADRM+D
Sbjct: 897 DEADRMVD 904
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 96.3 bits (229), Expect = 2e-20
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Frame = +2
Query: 158 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 337
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 338 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRCDGPIALVLAPTRELAQQIQQVAAD 502
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 503 FGHTSYVRNTCVFGGAPKREQARDLE--RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 676
+ + ++ FGG + + L + I++AT GRL DF+ G +L + Y+VL
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 677 DEADRMLD 700
DEADRM+D
Sbjct: 897 DEADRMVD 904
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 94.3 bits (224), Expect = 8e-20
Identities = 52/137 (37%), Positives = 73/137 (53%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
+ +P C LVL PTRELA Q+ QV + GG + Q L
Sbjct: 210 MIYRPKGASCTR--VLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 581 RGVEIVIATPGRLIDFL 631
G ++V+ATPGRLID L
Sbjct: 268 SGPDVVVATPGRLIDHL 284
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 93.9 bits (223), Expect = 1e-19
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Frame = +2
Query: 248 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 412
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 413 PPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 592
R+ DGP+AL+LAPTRELA QI + + + + +G + + ++ G +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
Query: 593 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP 715
I+I T GR++DF K +L +LV DEADR+L DM +P
Sbjct: 512 ILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDP 553
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 91.9 bits (218), Expect = 4e-19
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
Frame = +2
Query: 254 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCD 433
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 434 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 613
G AL+++PTRELA Q G V GG+ + R+ G+ I++ TPG
Sbjct: 148 GLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPG 206
Query: 614 RLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
RL+ + E + LVLDEADRMLDMGF Q+
Sbjct: 207 RLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQL 243
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 89.8 bits (213), Expect = 2e-18
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Frame = +2
Query: 239 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 403
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 404 --NNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 577
+ + GP AL++APTREL QI + T+ + T + GG + +Q R +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERII 282
Query: 578 -ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGF 709
++ +IV+ATPGRL +++ T + LV+DE DRM++ G+
Sbjct: 283 SQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGY 332
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 84.2 bits (199), Expect = 8e-17
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 581 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D F I
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDI 185
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 84.2 bits (199), Expect = 8e-17
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 401 INNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 580
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 581 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D F I
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDI 185
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 80.2 bits (189), Expect = 1e-15
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Frame = +2
Query: 275 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRCD 433
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 434 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATP 610
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 611 GRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGF 709
GRL +++ T + LV+DE DRM++ G+
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGY 165
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 400
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 401 INNQPPIRRCD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 577
+ + GP A+++APT+EL QI ++ + E + L
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWL 210
Query: 578 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
E +V+ TPG+L+ +YLV+DEAD +L G+E ++
Sbjct: 211 EDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEM 258
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 77.0 bits (181), Expect = 1e-14
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Frame = +2
Query: 128 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 307
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 308 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRCDGP--IALVLAPTREL 472
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 473 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 652
A Q +F Y NT + E+ D++ +I+++TP R++ L+K T+
Sbjct: 217 A---AQTYTEF--LKYCANTSISAANFSGEET-DIQH-ADILVSTPNRIVFHLDKIDTSS 269
Query: 653 QRCTYLVLDEADRMLDM 703
R +LV+DE+DR+ ++
Sbjct: 270 LR--WLVVDESDRLFEV 284
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +2
Query: 248 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 427
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 428 CDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 598
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 599 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 697
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +2
Query: 248 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 427
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 428 CDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 598
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 599 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 697
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 71.7 bits (168), Expect = 5e-13
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 391
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 392 IVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 571
+ I N ++ D AL+L+P+REL QI V F + V GG + +
Sbjct: 68 MRMIQN-AKLQPADIG-ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125
Query: 572 DLE-RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFE 712
+ + V I++ATPGRL ++ T + R LV+DEADR ++ FE
Sbjct: 126 MFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFE 177
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +2
Query: 248 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 427
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 51 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 105
Query: 428 CDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 598
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 106 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 164
Query: 599 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 697
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 165 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 69.7 bits (163), Expect = 2e-12
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 385
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 386 PAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 559
+ I+ +C + LAPT ELA+QI +V G + + + GG
Sbjct: 268 TMLCRIDVNLMCPQC-----ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 322
Query: 560 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 697
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 323 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 69.7 bits (163), Expect = 2e-12
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 385
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 386 PAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 559
+ I+ +C + LAPT ELA+QI +V G + + + GG
Sbjct: 293 TMLCRIDVNLMCPQC-----ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 347
Query: 560 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 697
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 348 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 69.7 bits (163), Expect = 2e-12
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Frame = +2
Query: 212 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 385
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 386 PAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKR 559
+ I+ +C + LAPT ELA+QI +V G + + + GG
Sbjct: 677 TMLCRIDVNLMCPQC-----ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA 731
Query: 560 EQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 697
+ R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 732 MRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.0 bits (134), Expect = 6e-09
Identities = 42/156 (26%), Positives = 75/156 (48%)
Frame = +2
Query: 254 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCD 433
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 434 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 613
++LAP R +AQ+ + G V TC+ + + ++ +++ TP
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL-----GFDTTAENDKISHVLMGTPK 118
Query: 614 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
DFL ++ R VLDEAD ML GF+ QI
Sbjct: 119 ---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQI 151
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Frame = +2
Query: 311 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP-PIRRCDGPIALVLAPTRELAQQIQ 487
P + +++ A TGSGKT+ Y+LP + + ++P I + A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQ-----AVILVPVQTLVAQIV 205
Query: 488 QVAADFGHTSYVRNTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNL 652
+ S V GA E +AR L +++ATP RL+ L +L
Sbjct: 206 DEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDL 265
Query: 653 QRCTYLVLDEADRM 694
+ +L++DEADRM
Sbjct: 266 SKLRFLIVDEADRM 279
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 437 PIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIAT 607
P+ ++L PTREL QQ Q F + +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 608 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 697
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 221 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 388
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +2
Query: 434 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 613
GP A+++APT+EL QI ++ + E + LE +V+ TPG
Sbjct: 96 GPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPG 155
Query: 614 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 721
+L+ +YLV+DEAD +L G+E ++
Sbjct: 156 KLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEM 191
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 41.5 bits (93), Expect = 6e-04
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Frame = +2
Query: 293 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRC--DGPIALVLAP 460
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 461 TRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIATPG 613
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 79 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 614 RLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
+L +E G L ++LDEAD+M+D F P I
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDI 169
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 41.1 bits (92), Expect = 8e-04
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Frame = +2
Query: 293 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI-VHINNQPPIRRC-----DGPIALVL 454
+Q + G+ LV A TG GKT A+++PAI + N+ C P L++
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQ--SNCFEYTKPSPSILIM 176
Query: 455 APTRELAQQIQQVAADFGHTSYVRN-TCVFGGAPKREQARD-------LERG-VEIVIAT 607
A T L Q+ F + C+ P R+ D +G +I T
Sbjct: 177 ASTSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCT 230
Query: 608 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQI 721
G+L +E G L ++LDEAD+M+D F P I
Sbjct: 231 IGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDI 269
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Frame = +2
Query: 329 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRCDGPIALVLAPTRELAQQIQQVA 496
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
Query: 497 ------ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 658
D +R+ + + +D +I T G+L +E T L
Sbjct: 190 EVLLGLIDMEDIIPIRDIKIEKLVASYQFTKD---QCDIAFCTMGKLKASIEDKTILLDN 246
Query: 659 CTYLVLDEADRMLDM 703
++LDE+D+M+D+
Sbjct: 247 LKMMILDESDKMIDI 261
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 35.5 bits (78), Expect = 0.039
Identities = 28/113 (24%), Positives = 53/113 (46%)
Frame = +2
Query: 314 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQV 493
+A+ GKN + A TGSGKT ++ A + I R +G L T QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKT---VIAANI-IKEHFESRSSEGKRFKALFMTPNSMILNQQA 358
Query: 494 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 652
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 35.5 bits (78), Expect = 0.039
Identities = 28/113 (24%), Positives = 53/113 (46%)
Frame = +2
Query: 314 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDGPIALVLAPTRELAQQIQQV 493
+A+ GKN + A TGSGKT ++ A + I R +G L T QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKT---VIAANI-IKEHFESRSSEGKRFKALFMTPNSMILNQQA 358
Query: 494 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 652
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 317 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 412
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.16
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 272 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDGPIAL 448
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 449 VLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 616
+ P ++A +V AD+ + +T V + + +RG +++I+TP R
Sbjct: 1372 YITPMEDMA---TKVYADWKRRLEPAIGHTIVLLTGEQTMDLKLAQRG-QLIISTPER 1425
Score = 28.7 bits (61), Expect = 4.4
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Frame = +2
Query: 272 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINN---QPPIRRCDGP 439
GYK IQ++ A+ K +L+ A TG+GKT +L + I N + + D
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEF 530
Query: 440 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 619
+ +AP + L +Q++ F V + +++ ++++ TP +
Sbjct: 531 KIVYIAPMKSL---VQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTPEKY 587
Query: 620 IDFLEKGTTNL--QRCTYLVLDEADRMLD 700
KG Q L++DE + D
Sbjct: 588 DVVTRKGGERAYNQMVRLLIIDEIHLLHD 616
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 290 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 397
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 290 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 397
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 353 TGSGKTLAYILPAIVH 400
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 486 SKLLQILDTHLMFVTRVCLVVLLKESK 566
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 334 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 155
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 154 D 152
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 334 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 155
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 154 D 152
+
Sbjct: 86 N 86
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 116 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 274
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 116 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 274
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 272 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRCDGPIAL 448
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 449 ------VLAPTRELAQQI 484
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,273,072
Number of Sequences: 27780
Number of extensions: 410224
Number of successful extensions: 1229
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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