Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0359
(632 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 310 2e-83
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 226 3e-58
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 214 2e-54
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 206 3e-52
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 136 4e-31
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 93 4e-18
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 76 8e-13
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 71 2e-11
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 60 4e-08
UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1; Tricho... 52 2e-05
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 50 4e-05
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 50 6e-05
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 49 1e-04
UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2; ... 47 4e-04
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 47 4e-04
UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more... 38 0.20
UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 37 0.46
UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1; ... 36 0.61
UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY0000... 34 3.3
UniRef50_UPI0000499E59 Cluster: hypothetical protein 73.t00008; ... 33 4.3
UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep: GLP_... 33 4.3
UniRef50_Q28VJ3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 310 bits (761), Expect = 2e-83
Identities = 142/189 (75%), Positives = 165/189 (87%)
Frame = +3
Query: 66 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 245
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 246 RKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 425
R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+V
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTV 123
Query: 426 EGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIH 605
EG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 606 CDGEPIKRE 632
C+GEPIKRE
Sbjct: 184 CEGEPIKRE 192
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 226 bits (553), Expect = 3e-58
Identities = 99/173 (57%), Positives = 129/173 (74%)
Frame = +3
Query: 114 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 293
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVCI + DD CP
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDDECPP 70
Query: 294 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 473
EKI+M D + I PC V YG RVH+LPIDD+VE LTG+LFE +LKPYF
Sbjct: 71 EKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLFENFLKPYF 130
Query: 474 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKRE 632
+E+YRP+ + D+F+ RG MR+VEFKVVE DP +CIV+PDT+IH +G+PI RE
Sbjct: 131 LESYRPVKKGDSFVCRGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHRE 183
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 214 bits (522), Expect = 2e-54
Identities = 97/189 (51%), Positives = 134/189 (70%), Gaps = 1/189 (0%)
Frame = +3
Query: 69 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 248
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
Query: 249 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 428
T+CI+L+D++ + KIR+ D+V + CP + YGK++ +LPIDD++E
Sbjct: 66 HSTICIILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVLPIDDTIE 125
Query: 429 GLT-GNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIH 605
GL LFE++LKPYF E+YRP+ + D F+VRGG +VEFKVVE DP FCIV+PDTVI+
Sbjct: 126 GLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIY 185
Query: 606 CDGEPIKRE 632
+G+PIKR+
Sbjct: 186 YEGDPIKRD 194
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 206 bits (504), Expect = 3e-52
Identities = 110/190 (57%), Positives = 137/190 (72%)
Frame = +3
Query: 63 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 242
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 243 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 422
+R++TVCIVLSDD D+KIR+ V+ RV + D
Sbjct: 60 KRRDTVCIVLSDDTVTDDKIRVNRV--------------------VRSNLRVR---LGDI 96
Query: 423 VEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVI 602
V L F+VYL+PYF EAYRP+ + D F +RGGMRAVEFKVVETDP P+CIV+PDTVI
Sbjct: 97 VRNL----FDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYCIVSPDTVI 152
Query: 603 HCDGEPIKRE 632
H +G+ IKRE
Sbjct: 153 HFEGDAIKRE 162
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 136 bits (329), Expect = 4e-31
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 126 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 305
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TV I +S+ E +
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVAIAISNRQ-DKESVH 75
Query: 306 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFMEA 482
M D ++I P S+ +VHILP DS+ G NL + YL PYF++A
Sbjct: 76 MNSVIRKNLGIQIGDFITIQPTASLPQLTKVHILPFQDSISGTNEKNLTQNYLIPYFLDA 135
Query: 483 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKRE 632
YRP+ + D F+V+ + +EFK++ T+P +V P T+++ +G +KRE
Sbjct: 136 YRPVSKGDCFVVKMA-KEIEFKIIATEPEDMGVVGPITILYTEGGTVKRE 184
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 93.5 bits (222), Expect = 4e-18
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Frame = +3
Query: 126 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 305
NR IV + D+S + LS K+ L LF+GD V LKG+ K T +V S ++ +
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAMVQSREDVDKIVVL 71
Query: 306 MXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL----------------- 434
M D+V + P ++ Y KR+ ++P + +EGL
Sbjct: 72 MNKTMRANLGVNLGDIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAP 131
Query: 435 ------TGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGM----RAVEFKVVETDPSPFCIV 584
T +LF++ + PYF + RP+ +TF V R +EFKVV TDPSP CIV
Sbjct: 132 APFPGPTYDLFDICIAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIV 191
Query: 585 APDTVIHCDGEPIKRE 632
I +GEPI R+
Sbjct: 192 MDGGEIFYEGEPIDRD 207
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 75.8 bits (178), Expect = 8e-13
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 123 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 299
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE V IV D+
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAIVREDNRLNKYS 160
Query: 300 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFE-VYLKPYFM 476
+ + +D++ I P ++K K V + P +D+V +T E L Y
Sbjct: 161 VSISFSIKRNLRLMHNDIIKIYPLSNIKNIKNVILSPFNDTVNNITKQEIEKEILNTYLK 220
Query: 477 EAYRPIHRDDTFMVRGGMRAVEFKVVE 557
+Y+P+ D+T + + +E KV++
Sbjct: 221 NSYKPLSVDNTIYINYKNKRIELKVLK 247
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 70.9 bits (166), Expect = 2e-11
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Frame = +3
Query: 123 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEK 299
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE + I D
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAIAKLDRRLQKHF 329
Query: 300 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLT-GNLFEVYLKPYFM 476
+ + +D++ I P V + V + P D+V GL+ L + L+PY
Sbjct: 330 VVISFAMKKNLRLMHNDIIKIFPLMKVHPLRTVVLSPFSDTVGGLSKAELEQEVLRPYLK 389
Query: 477 EAYRPIHRDDTFMVRGGMRAVEFKVVE 557
++P+ + R VEF+VV+
Sbjct: 390 GTFKPLCEGTNVYIPHKGRKVEFRVVK 416
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 60.1 bits (139), Expect = 4e-08
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Frame = +3
Query: 123 PNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVL--SDDNCPDE 296
P+ V++ D +V +S KM QL G V +K + KE++ + L S + CP
Sbjct: 4 PSAFFVDQCQKDGFNVF-MSPEKMAQLSFREGQVVRIK-TQSKESILVKLYSSKEECPIA 61
Query: 297 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 476
I++ V + V V I + ++++G+ G++ ++ +
Sbjct: 62 NIQIPRAVRNNIHCFLGQTVVVEAAEKVAKADDVIISAVSETIDGIDGSIIDLLYASNYD 121
Query: 477 EAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKRE 632
PI RD V R +EFKVV P I+ VI +PI RE
Sbjct: 122 FVGMPIRRDQIIPVYALNRVIEFKVVNCSPEEEVIIQDKEVILYRNQPIHRE 173
>UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 2005
Score = 51.6 bits (118), Expect = 2e-05
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = +3
Query: 144 EAVSDDNSVVA-LSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXX 320
+ V D N + A +S M L + G V ++ ++ +T+ + D PD IR+
Sbjct: 9 DKVDDFNDLNAYISNKAMNALGISDGSVVSVRNQQNSQTLVAIQGCD-MPDNVIRLSRCH 67
Query: 321 XXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHR 500
+ V I+ + + V + PI D++ G++GN ++ + + P++
Sbjct: 68 RINIGSFLGETVKISKPIKSQKAEIVLVAPIADTINGISGNFCDLIQESSYKFNNFPVYP 127
Query: 501 DDTFMVRGGMRAVEFKVVETDPS-PFCIVAPDTVIHCDGEPIKR 629
+ F V R VEF+V++ PS IV V +P+ R
Sbjct: 128 NFIFPVYTMQRVVEFQVIKCSPSGAHVIVTSADVFSSRSQPVNR 171
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 50.4 bits (115), Expect = 4e-05
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 123 PNRLIVEEAVSDDNSVVALSQAK--MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDE 296
PN L V V D NS + + K +L + G+ V ++GK+R +TVC+V D N D
Sbjct: 133 PN-LFVLSGVFDGNSSIEIRMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDN 191
Query: 297 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSV 425
++ + DV+SI + K V ++P +DSV
Sbjct: 192 QVLIHSDTRRNLKLRTGDVMSIDLISDIPPAKLVKLMPFEDSV 234
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 49.6 bits (113), Expect = 6e-05
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Frame = +3
Query: 192 MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPC 371
M LQ+ RGD VLL G+R++ETV I + D + + + D + + P
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAIAMPDRSLEARHVVLHAHALKNIKLHAQDAIKVTPQ 60
Query: 372 PSVKYGKRVHILPIDDSV----EGLTGN-------------LFEVYLKPYFMEAYRPIHR 500
+ + +RV +LP D++ +G G E +F RP+
Sbjct: 61 RLLPHARRVFVLPFSDTLGDVRDGGAGRSEGRDRDAPGEKPSVEAVATKFFRHTSRPVKL 120
Query: 501 DDTFMV---------RGGMRAVEFKVVE-----TDPSPFCIVAPDTVIHCDGEPIKR 629
D F++ G VE KV++ D +V T + C+GEP+ R
Sbjct: 121 GDQFVLEFPVHAKGEHGATGKVEVKVMQIDTDGKDDQEVALVDDATELICEGEPLDR 177
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +3
Query: 156 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 335
+ N V + +A+ +L + GD + +KG+RRK TVC V ++ ++
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 213
Query: 336 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 446
DVV + +V K VHILP D++E L L
Sbjct: 214 LRLGDVVFMEKINTVPEAKFVHILPFKDTIEPLIKQL 250
>UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 413
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 390 KRVHILPIDDSV-EGLTGNLFEVYLKPYFME-AYRPIHRDDTFMVRGGMRAVEFKVVETD 563
KR+H++P D++ + + ++F+ YLKP+ + P ++F G V+FK++ TD
Sbjct: 202 KRIHVMPFSDTLPQTYSFDIFQDYLKPFLSRYTFHPFSEGESFTYNG----VQFKIIATD 257
Query: 564 PSPF-CIVAPDTVIHCDG 614
P+ + +T I+C G
Sbjct: 258 PAGVKARIGDNTTIYCQG 275
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 156 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXX 335
+ N V + + + +L L GD V ++G+RRK TVC V ++ ++
Sbjct: 129 NSNVNVKIGKEQANKLNLMTGDFVKVRGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR 188
Query: 336 XXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 446
D+V + ++ K VHILP D++E L L
Sbjct: 189 LRLGDIVFMDKINTIPEAKIVHILPFKDTIEPLIKQL 225
>UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more
than twice the length of this protein; n=1; Aspergillus
niger|Rep: Remark: Cdc48p of S. cerevisiae is more than
twice the length of this protein - Aspergillus niger
Length = 302
Score = 37.9 bits (84), Expect = 0.20
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 420 SVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTV 599
+ E L+G L ++ PYF R I+ D + G +EFKV+ P + V T
Sbjct: 179 TTENLSGRLLHDFVNPYFTRCTRLINVHDHIFISSGACDIEFKVLSIKPLEYGFVTQKTN 238
Query: 600 IHCDG 614
I G
Sbjct: 239 IVLSG 243
>UniRef50_A3H629 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Caldivirga maquilingensis IC-167|Rep: AAA family ATPase,
CDC48 subfamily - Caldivirga maquilingensis IC-167
Length = 852
Score = 36.7 bits (81), Expect = 0.46
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)
Frame = +3
Query: 132 LIVEEAVSDD--NSVVALSQAKMEQLQLFRGDTVLLKGKRR--KETVCIVLSDDNCPDEK 299
L V EA S D +V + M ++ + GD V + G +R V SDD D
Sbjct: 10 LRVAEARSRDVGRGIVRVPMRLMRKIGIEPGDYVEISGNKRIAYAQVWPAYSDDEDKDI- 68
Query: 300 IRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFME 479
IRM D+V + +++ +RV + P+ + ++ + YLK ++
Sbjct: 69 IRMDGFIRQNIDVSLDDLVKVRKA-NLRPAQRVTVAPVGEEIK-----IDPDYLKKSYLV 122
Query: 480 AYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIK 626
+P+ R F + A++F + + P+P V +T + +P++
Sbjct: 123 G-KPVWRGAIFELPYYTGALKFMITQVIPAPAAYVGTETEVTMQDKPVQ 170
>UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 615
Score = 36.3 bits (80), Expect = 0.61
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 390 KRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPI-HRDDTFMVRGGMRAVEFKVVETD 563
+ VHI+P+ D++ N+F Y+KPY Y + DTF +G V+FK++ D
Sbjct: 370 RNVHIVPLYDTLPTTYNYNIFADYIKPYIERHYLSLFSMHDTFFYKG----VQFKIMGID 425
Query: 564 P 566
P
Sbjct: 426 P 426
>UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY00003;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00003 - Plasmodium yoelii yoelii
Length = 628
Score = 33.9 bits (74), Expect = 3.3
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 396 VHILPIDDSVEGLTG-NLFEVYLKPYFMEAY-RPIHRDDTFMVRGGMRAVEFKVVETDP 566
VHI+P+ D++ NLF Y+KPY Y DTF RG V+FK++ +P
Sbjct: 372 VHIVPLYDTLPTTYNYNLFIDYIKPYIERHYLNTFSIYDTFFYRG----VQFKIMGVEP 426
>UniRef50_UPI0000499E59 Cluster: hypothetical protein 73.t00008;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 73.t00008 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 33.5 bits (73), Expect = 4.3
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 63 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFR-----GDTV 227
++D+ S DD+ T + + + L ++ DD+ AL++ + E+ + F D
Sbjct: 130 ISDSDSDDDVKTDVKKTTTKKEELSDSDSDDDDDIAAALAKKRAERAKKFAISDSDSDDD 189
Query: 228 LLKGKRRKETVCIVLSDDNCPDEKIR 305
+K +K T I LSD + D+ I+
Sbjct: 190 DIKPAAKKTTKKISLSDSDSDDDDIK 215
>UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep:
GLP_15_26945_31573 - Giardia lamblia ATCC 50803
Length = 1542
Score = 33.5 bits (73), Expect = 4.3
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Frame = -3
Query: 429 PQLN-HQLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSH-------QGNYHL 274
P +N + +++ G + S K+ +P HEG FS E+ H G Y
Sbjct: 1125 PHMNPYTISISGTRYEFSTKNDTYTVPFPLTVHEGRFSVPTKIEYFHPDRPTCKDGEYAW 1184
Query: 273 RARCKRFPCGVCL*ARLCHHGRVEVAP 193
R + F C +C C G + P
Sbjct: 1185 RLQTGAFTCMICPTGYFCSEGVMNPCP 1211
>UniRef50_Q28VJ3 Cluster: Putative uncharacterized protein; n=1;
Jannaschia sp. CCS1|Rep: Putative uncharacterized
protein - Jannaschia sp. (strain CCS1)
Length = 348
Score = 32.7 bits (71), Expect = 7.5
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 78 SPDDLST--AILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 251
S DL+T A++R + +P R+ + DD + + + ME L GD + L G++
Sbjct: 259 SAADLATGRAVVRDRTKPMRIFYH-LMLDDPACLLVENCPMETAHL--GDVMALGGRQIS 315
Query: 252 ETVCIVLSD 278
+ C VLSD
Sbjct: 316 QAACPVLSD 324
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,943,456
Number of Sequences: 1657284
Number of extensions: 13360103
Number of successful extensions: 36425
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 35089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36410
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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