Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0358
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 38 0.007
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 36 0.028
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.086
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 33 0.35
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 32 0.61
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.80
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 1.1
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 1.4
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.9
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 30 1.9
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 30 2.5
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.5
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 2.5
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 3.2
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 3.2
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 29 3.2
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 29 4.3
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 5.7
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 28 7.5
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 7.5
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 28 9.9
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +3
Query: 423 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 599
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 600 DLAPNVESDAAAVPEIKTP--EAADAPKLADNPVDEDKPAD 716
+ P+V+ A V E + P EA + A++P ++ P +
Sbjct: 1231 EAGPSVQEAEAPVKETERPVEEAEVQAEEAESPAEKGAPVE 1271
Score = 35.5 bits (78), Expect = 0.049
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +3
Query: 405 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATD-AEGSADSAAIIP 581
++E+P +A ++ + E PAA+PE + E +A V + + EE + + AE D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEEPEALNEKAEDPKDEDETQE 646
Query: 582 NMVK-KIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
+ ID A E+ A E K E + + V+EDK
Sbjct: 647 EKAEVPIDEA-EAEAQAEVAGEEKALEEEAETLVEETKVEEDK 688
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
+ K D EE A P D + E +A AE++ EEK +AE + + + +
Sbjct: 637 DPKDEDETQEEKAEVPID-EAEAEAQ-AEVAGEEKALEEEAETLVEETKVEEDKAPIQEA 694
Query: 606 APNVESDAAAVPEIKTP-----EAADAPKLADNPVDE-DKPA 713
+V+ A V EI+ P E K D PV E + PA
Sbjct: 695 EASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPA 736
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/97 (30%), Positives = 43/97 (44%)
Frame = +3
Query: 411 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 590
E P EA+S D KVE P + E + EV+ATV E+ + +A E A +P +
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE-----EAEVP--I 74
Query: 591 KKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDE 701
+K + P E EA A + + PV E
Sbjct: 75 EKAETQPVDTEGPVENAETSFEEAEAADEETEEPVKE 111
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
+ +++ E ++ D+ +EP + E +A+ E K T+ A+ P
Sbjct: 165 EENDMGGTEEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEP 224
Query: 582 NMVKKI--DLAPNVESDAA--AVPEIKTPEAADAPKLADNPVDEDKPAD 716
+K+ + P E+ A E++ P+ ++PK D P +ED P +
Sbjct: 225 KEDEKVTEEETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKE 273
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +3
Query: 453 EEPA--AQPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPNMVKKIDLAPNVE 620
E+P+ +P + K +++A E + + K P A G D+ P VE
Sbjct: 85 EKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPKKGADKATPKEVE 144
Query: 621 SDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 716
+ V + +A K NP EDKPA+
Sbjct: 145 ASGDEVASEAEAKPVEAAKTESNPAKEDKPAE 176
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 34.7 bits (76), Expect = 0.086
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +3
Query: 429 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 608
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 609 PNVESDAAAVPEI 647
+S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 32.7 bits (71), Expect = 0.35
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Frame = +3
Query: 300 IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKS-ADIKVEEPAAQ-P 473
+P D + P SD+ + ++ KS +D +V P++ P
Sbjct: 591 VPTTSDDQVTPSASDVPTTSDDQVTPSASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVP 650
Query: 474 EDSKTEVQATVAEISKEEK----PSATDAEGSAD-----SAAIIPNMVKKIDLAPNVESD 626
S +V + +++ PSA+D ++D SA+ +P + P+
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVP-AASDNQVTPSASDV 709
Query: 627 AAAVPEIKTPEAADAPKLADNPV 695
+A + TP A D P +DN V
Sbjct: 710 PSASDDQVTPSAIDVPTTSDNQV 732
Score = 29.9 bits (64), Expect = 2.5
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Frame = +3
Query: 279 SNDEV--PA--IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADI 446
S+D+V PA +P A + + P SD+ +S++P
Sbjct: 818 SDDQVTPPASDVPTASDNQVTPSASDVPTTSDDHVTP--------SASDVPTTSDDQVTP 869
Query: 447 KVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSAD-----SAAIIPNMVKKIDLA 608
+ +D T + V S ++ PSA+D ++D SA+ +P +
Sbjct: 870 SASDVTPTSDDQVTPSSSDVTPTSDDQVTPSASDVPTASDDQVTQSASNVPTASDN-QVT 928
Query: 609 PNVESDAAAVPEIKTPEAADAPKLADNPVDE 701
P+ A + TP A+D P +D+ V +
Sbjct: 929 PSASDVLTAKDDHVTPSASDVPTTSDDQVTQ 959
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Frame = +3
Query: 405 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSADSAAIIP 581
+S++P A + +D T + V S ++ P A+D ++D P
Sbjct: 736 ASDVPTASDDQVTPSASDVPTTSDDQVTPSASDVMSTSDDQVTPPASDVMSTSDDQVTPP 795
Query: 582 NM----VKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPV 695
+ P+ A + TP A+D P +DN V
Sbjct: 796 ASDVPTTSDDQITPSSSDVPATSDDQVTPPASDVPTASDNQV 837
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 31.9 bits (69), Expect = 0.61
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +3
Query: 423 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 602
+E KS D ++P +PED + E E+KP + D P K++
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPE--DKLE 82
Query: 603 LAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 716
P E + PE PE D P+ EDKP D
Sbjct: 83 DKP--EDSSEEKPE-DNPE--DKPEYKPEDKPEDKPED 115
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 420 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 581
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 450 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 611
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++P
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISP 1178
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 3/145 (2%)
Frame = +3
Query: 285 DEVPAIPEAKKDDIAP-EDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEP 461
D +P P+ + ++P ++ ++ A + P+A +A + E
Sbjct: 328 DSIPTAPKVFPEKLSPSKEREVTKQPEAPGATAQPEAPDATAQ--PEAPDATAQPEATET 385
Query: 462 AAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAV 638
AQPE K T + ++ E P AT A+ A A +P + P A
Sbjct: 386 TAQPEAPKATALPEAPKATAQPEAPEAT-AQPEAPKATALPE-APEATAQPEATETTAQP 443
Query: 639 PEIKTPEAADAPKLADNP-VDEDKP 710
K +AP+ P ED P
Sbjct: 444 KAQKATAQPEAPEATAQPEAPEDNP 468
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 566
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 453 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAA 632
++P +PED + E E+KP A + D +P K + P + +
Sbjct: 150 DKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPE--DKPEYRPEYKPEDK 207
Query: 633 AVPEIKTPEAADAPKLADNPVD--EDKPAD 716
PE K PE K D P D +DKP D
Sbjct: 208 --PE-KKPEKKPEDKSEDKPEDKHKDKPED 234
Score = 28.7 bits (61), Expect = 5.7
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 2/97 (2%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
+AKS D + P PED E E+KP + S D + L
Sbjct: 177 KAKSEDKPEDMPEDMPEDKPEYRPEYKPEDKPEKKPEKKPEDKSEDKPEDKHKDKPEDKL 236
Query: 606 APNVESDAAAVPEIKTPEAADAPKLADNPVD--EDKP 710
E PE PE K D P D EDKP
Sbjct: 237 EDKPEDKKEEKPE-DNPEEKPEDKQEDKPEDKQEDKP 272
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.9 bits (64), Expect = 2.5
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +3
Query: 405 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 584
SS P + KS+ EE ++P S + A + +EEK A+ S D P
Sbjct: 439 SSPAPQEDDKSSSA-TEEYKSEP--SSAQPSANQSPEPEEEKEEASPVP-SKDEEETSP- 493
Query: 585 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKL-ADNPVDEDKP 710
M K + P PE + EAA+ + A +PV+ED P
Sbjct: 494 MPAKGEGTPEKREIEEESPEEEKGEAAEKAAVHAQSPVEEDAP 536
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 417 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 572
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 408 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 560
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 572
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 573 IIPNMVKKIDLAPN 614
+ ++ P+
Sbjct: 1085 SVSALLSVFATEPS 1098
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 532 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 401
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = +3
Query: 432 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 611
KS D +P +PED + Q E E+KP + D K
Sbjct: 418 KSKDKLEVKPEDRPEDKPEDKQQNKPEDKPEDKPEDKPEDKPEDKPEDKQQNKPKYKPED 477
Query: 612 NVESDAAAVPEIK---TPEAADAPKLADNPVDEDKPAD 716
E P+ K PE K DNP EDKP D
Sbjct: 478 KPEDKPEDKPKDKLEDRPEDKPEEKSKDNP--EDKPED 513
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +3
Query: 453 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAA 632
++P +PED+ + E E KP + S D P K + P E
Sbjct: 3 DKPEDKPEDTPEDKPEDKPEGKPEGKPEGKPKDKSGDKPEDKPE--NKPEDQP--EDKPG 58
Query: 633 AVPEIKTPEAADAPKLADNPVD--EDKPAD 716
PE KT + + K D P D EDKP D
Sbjct: 59 DKPEDKTEDKPE-DKPEDKPEDKPEDKPGD 87
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK--I 599
+ + D K++ E + ++ + + E S ++E S +++A K
Sbjct: 98 QTRIQDAKMDSEIVSKESERKKLSPEIGD-GIREVASEENSEKSIETSAASETATKSPST 156
Query: 600 DLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 719
+ + +SD V EI + + D+ K++ NP D +P D+
Sbjct: 157 ENTGSTKSDKDDVVEISSDD--DSDKISANPTDVQEPMDL 194
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Frame = +3
Query: 453 EEPAAQPE-----DSKTEVQATVAEISKEEKPSATDAEGSADSAAI----IPNMVKKIDL 605
EEP PE D K E SK ++ + A + +P VK++
Sbjct: 288 EEPNTDPEEKEGPDEKENADEVFQERSKLDRSPPLRKKHEPFVAPLDDTPVPEPVKEVPA 347
Query: 606 APNVESDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 719
P + + +K P A AP P D DKPA +
Sbjct: 348 RPVTKQEPFKQTKPVKEPSLAPAPTANMVPSDRDKPAGL 386
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Frame = +3
Query: 405 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP- 581
S + P E K D+K +D T ++ + +E KP + A A P
Sbjct: 255 SGDAPHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPKLKAVQNDAPKKANKPA 314
Query: 582 ----NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 713
VK+ N + P +A+A + NP + +PA
Sbjct: 315 KKAKKPVKRAKKVLNKKKMDTLPRGAHRPASANAQRRPQNPYAQQRPA 362
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/86 (30%), Positives = 34/86 (39%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
+ S + +AEA EE A+PE T E S E KP A+ E +A A P
Sbjct: 492 RKSPVSEAEAPKPSAAKEE--AEPEQMDTSEPEPAKEPSSEIKPEASKPE-TAKPEATSP 548
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPE 659
+ P ES A E + E
Sbjct: 549 TDGEPAKPEPAEESSAKPSEEAEIME 574
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 28.7 bits (61), Expect = 5.7
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKV-EEPAAQPEDSKTEVQ----ATVAEISKE-EKPSAT--DAEG 554
A S A+A S V EE A+ E K EV + ++ IS + + AT DA G
Sbjct: 254 AASGYASGADAASGSNAVPEEVASGFEGRKDEVTLESGSGMSFISGDNDSAEATLEDATG 313
Query: 555 SADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDE 701
+ +P I A N++ D A I + + APKL DN E
Sbjct: 314 ESGDEDFLPG---SIGGATNLQQDEAKAQTISSGSGSAAPKLTDNAAKE 359
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/105 (21%), Positives = 41/105 (39%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
K S+ E + + + + K E + + ++ KEE + S +S +I
Sbjct: 840 KMSDKKKKEESDEEFRDDTSKQSDKKKKMEFEGSFSDDKKEESDNIKKGSESKESFVVIK 899
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 716
+ I ++ DA KT + KL VD D+P+D
Sbjct: 900 DEKGNILYKGMMDIDALK----KTESDGKSEKLKIKKVDSDEPSD 940
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
AK + +A K A + + V ATVA S + T + S D+A +I
Sbjct: 1732 AKITPKASTDAAKVTPKASTEATEMTQKFSNVPATVALKSSNVEAKITP-KSSTDAARLI 1790
Query: 579 PNMVKKIDLAPNVESDAAAVPEIKTPEAA 665
P K + NV+S ++ TP+A+
Sbjct: 1791 PKASKSSTGSVNVKSRSSTNATQITPKAS 1819
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 456 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAA 635
+PA+QP A+ +P++ A A A P A S A+
Sbjct: 46 QPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPAS 105
Query: 636 VPEIKTPEAADAPKLADNPVDEDK 707
P ++ A + P++ + V E K
Sbjct: 106 QPASQSASAQNKPRIVEKEVLEKK 129
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 435 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 599
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 408 SEIPDAEAKSADI-KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
+E P E K + KVE+P + PE K EV+ V+ KP G + P
Sbjct: 1013 NEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAP 1067
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADA 671
V+ ++ AP D P + P+ DA
Sbjct: 1068 VTVEVVETAPITLEDMK--PTGEAPKVVDA 1095
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,934,081
Number of Sequences: 59808
Number of extensions: 279514
Number of successful extensions: 1416
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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