Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0358
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 36 0.025
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 36 0.025
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 36 0.025
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 36 0.025
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 36 0.033
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.044
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 35 0.076
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.18
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 33 0.31
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.71
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 2.2
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 2.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 2.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 2.2
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 29 2.9
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.9
AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.9
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.0
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.0
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.0
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 6.6
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 6.6
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.6
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 6.6
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 6.6
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 28 8.8
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 8.8
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 28 8.8
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 28 8.8
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 8.8
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 36.3 bits (80), Expect = 0.025
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 579 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 704
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 474 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 653
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 654 PEAADAPKLADNP 692
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 36.3 bits (80), Expect = 0.025
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 579 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 704
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 474 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 653
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 654 PEAADAPKLADNP 692
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 36.3 bits (80), Expect = 0.025
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 579 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 704
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 474 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 653
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 654 PEAADAPKLADNP 692
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 36.3 bits (80), Expect = 0.025
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 579 PNMVKKIDL--APNV--ESDAAAVPEIKTPEAADAPKLADNPVDED 704
P + D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 474 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKT 653
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 654 PEAADAPKLADNP 692
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 35.9 bits (79), Expect = 0.033
Identities = 37/145 (25%), Positives = 52/145 (35%)
Frame = +3
Query: 279 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 458
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 459 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAV 638
PA P +T A AE + P+A + +A +A P D P + A A
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP---APAPAA 619
Query: 639 PEIKTPEAADAPKLADNPVDEDKPA 713
E P A A P E+ PA
Sbjct: 620 EETPAPAPAVEETPAPAPAVEETPA 644
Score = 31.5 bits (68), Expect = 0.71
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +3
Query: 417 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 584
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 585 MVKKIDLAPNVESDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 719
A + E+ A + +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = +3
Query: 417 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 596
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 597 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 713
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 572
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 573 IIPNMVKKIDLAPNVESDAAAVPEIKTPEAADA 671
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.044
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 566
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 567 AAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAP 674
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 34.7 bits (76), Expect = 0.076
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEK---PSATDAEGSADSAAIIPNMVKK 596
EA ++ VEEP TE A ++ +E K + T A+ A+ + +
Sbjct: 440 EAAASSESVEEPITAVHVEATESAAPADKVHEETKIDSAAETHADAPVVDASPAEDQASE 499
Query: 597 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 716
+ AP+VES A + P D + V+ PAD
Sbjct: 500 VTEAPHVES-AKSAPATSEDHKEDVAQATSEQVETQAPAD 538
Score = 29.5 bits (63), Expect = 2.9
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Frame = +3
Query: 285 DEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPA 464
+ PA+ E KD+ AP + + A A+SA VEE A
Sbjct: 576 ESAPALAEEHKDEAAPSE------------PVQDVPVEEVIEAVHIAPAESAPASVEE-A 622
Query: 465 AQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPN-VES-- 623
A E ++ V+ AT A S E+P A +A+S P K + +P +ES
Sbjct: 623 APSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEEHKDEASPTALESVE 682
Query: 624 DAAAVPEIKTPEAADAP 674
D + + E+A AP
Sbjct: 683 DVIEAVHVASTESAPAP 699
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.18
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +3
Query: 432 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 608
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 609 PNVESDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 716
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = +3
Query: 405 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 584
S + P AKS D + ++ E+ + + + + SK K +A+D + + A +
Sbjct: 185 SKKSPKKSAKSKD----DDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKS 240
Query: 585 MVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
K P E D +KTP+ K A+ P +ED+
Sbjct: 241 KKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.71
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 578
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 579 PNMVKKIDLAPNVESDAAAVPEIK-TPEAADAPKLADNPVD 698
P K D +P A VP+ + P A P+ P D
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
Score = 27.9 bits (59), Expect = 8.8
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Frame = +3
Query: 417 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI------I 578
P+ AKS D ++ A+P +S V K+ KP D + A+ +
Sbjct: 761 PEPVAKSRDPSPKKAKAEP-NSPVVPPTPVKNPVKKWKPPWEDDDAPAEPVNVPEPEKKT 819
Query: 579 PNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLA-DNPVDEDKPAD 716
P + KK + P S AVP K DAP ++ P KP +
Sbjct: 820 PVLAKKTPVKPRDPSPKKAVP-AKPSTKTDAPPVSVKKPEPVSKPKE 865
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 450 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 596
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 591 KKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 719
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/102 (23%), Positives = 45/102 (44%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 581
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 582 NMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDK 707
+ KK + +P+ + P T + D K P K
Sbjct: 1429 SPTKK-EKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTK 1469
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +3
Query: 441 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVE 620
DIK + A + ++ +T+ + + +E K + D+ P K N++
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 621 SDAAAVPEIKTPEAADAPKL 680
+ +PE +TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 399 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 560
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical
protein F58H7.5 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 438 ADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNV 617
A+++VEE P+DS E + +AE K++ S + E + L V
Sbjct: 93 AEMEVEE-VDSPQDSPDEFEEDIAEEVKDKSASEEEEEDEHQVFQFENPRDLEDPLRRRV 151
Query: 618 ESDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 719
+ + P DAP ++A NPVD++ DI
Sbjct: 152 PYEIHF--PFREPPQEDAPMRMAQNPVDQEAIDDI 184
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 525 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADN-PVDE 701
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 702 DKP 710
P
Sbjct: 340 TTP 342
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 468 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 611
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 468 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 611
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 606 APNVESDAAAVPEIKTP 656
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 606 APNVESDAAAVPEIKTP 656
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 606 APNVESDAAAVPEIKTP 656
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 426 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 606 APNVESDAAAVPEIKTP 656
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +3
Query: 402 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 557
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 558 ADSAAIIPNMVKK 596
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 132 VSLAMPVAEEKDVVPAQPIL 191
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 132 VSLAMPVAEEKDVVPAQPIL 191
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 423 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI- 599
+ K+AD + PA P + + +A P+A D + + +P +
Sbjct: 46 SSTKAADQQPAAPAPAPASVQQQPEAPAPA------PTAPDVQQPGPAPVPVPEPAQLAP 99
Query: 600 DLAPNVESDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 719
AP DA AA P +TP+ A AP+ + PA +
Sbjct: 100 QSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPV 140
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 132 VSLAMPVAEEKDVVPAQPIL 191
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 132 VSLAMPVAEEKDVVPAQPIL 191
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 429 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 606 APNVESDAAAVPEIKTPEAA 665
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 414 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVA-EISKEEKPSATDAEGSADSAAIIPNMV 590
+PD E D +VEEP A+ K V A A E + E +A+ S++ + P+
Sbjct: 1 MPDPEDPGRDEEVEEPLAK----KIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAE 56
Query: 591 KKIDLAPNVESDAAA 635
D P ++++A A
Sbjct: 57 ---DFVPEIDNEATA 68
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 411 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 551
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 519 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPNVESDAAAVPEIKTPEAADAPKLADNPV 695
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 696 DEDKP 710
P
Sbjct: 247 TSQSP 251
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 429 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 605
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 606 APNVESDAAAVPEIKTPEAA 665
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 418 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 519
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,626,461
Number of Sequences: 27780
Number of extensions: 208502
Number of successful extensions: 906
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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