Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0357
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000121-1|AAH00121.1|  521|Homo sapiens C17orf53 protein protein.     35   0.25 
CR456363-1|CAG30249.1|  212|Homo sapiens Em:AC008101.5 protein.        31   3.1  
BC011352-1|AAH11352.1|  445|Homo sapiens HTRA1 protein protein.        30   7.3  

>BC000121-1|AAH00121.1|  521|Homo sapiens C17orf53 protein protein.
          Length = 521

 Score = 35.1 bits (77), Expect = 0.25
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -3

Query: 617 ERCGGNAAKRAAVPLRPLGSCLRAPRPLLYTCGMLACVVRGLDGYFSCCATLPPLRSASL 438
           +R G   AK+A V +   GSC + P P ++  G+++     LD    C    PPLR  ++
Sbjct: 190 QREGSVLAKKARV-VDLSGSCQKGPVPAIHKAGIMSAQDESLDPVIQCRTPRPPLRPGAV 248


>CR456363-1|CAG30249.1|  212|Homo sapiens Em:AC008101.5 protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = +3

Query: 507 TREHAASIEQRTRSAQAAAQGTQRNSSSLRRVPTAPLR 620
           TR  AAS  + T  A+A   GT R  S LRR P +PLR
Sbjct: 82  TRRSAASSRRSTAGARA---GTARTGSLLRRGPPSPLR 116


>BC011352-1|AAH11352.1|  445|Homo sapiens HTRA1 protein protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = -3

Query: 605 GNAAKRAAVPLRPLGSC-LRAPRPLLYTCGMLACV----VRGLDGYFSCCATLPPLRSAS 441
           G A   AAVP RPLG+   R PRP     G+  C     V G D   +  A L  LR+AS
Sbjct: 44  GGARLGAAVPGRPLGAFGRRVPRPRRAQAGLCVCASSEPVCGSDA--NTYANLCQLRAAS 101

Query: 440 LR 435
            R
Sbjct: 102 RR 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,409,047
Number of Sequences: 237096
Number of extensions: 1811195
Number of successful extensions: 4758
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4758
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)