Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0355
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    27   0.42 
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    24   5.2  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   5.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    24   5.2  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.0  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 245 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 373
           + G Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGGGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 163 GAHTSGPGQ*CSRFYVQELEAALLR 237
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 375 RPPRHMLPKAP*PDLWVPPPRTRGIRATARP 283
           RPP H  P       W+ PP  R   +TA P
Sbjct: 93  RPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 163 GAHTSGPGQ*CSRFYVQELEAALLR 237
           G +T+  G   SRFYV++LE   LR
Sbjct: 199 GLYTTESGIHLSRFYVRDLEVNDLR 223


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 121 DGAGCSQAPPVRIQGAHTSGPG 186
           DG     +PP+ + G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,779
Number of Sequences: 2352
Number of extensions: 14912
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)