Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0351
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   272   2e-75
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   272   2e-75
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   225   4e-61
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.15 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  272 bits (666), Expect = 2e-75
 Identities = 125/173 (72%), Positives = 155/173 (89%)
 Frame = +2

Query: 2   VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
           VLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++
Sbjct: 23  VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADIS 82

Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
            N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  +
Sbjct: 83  GNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCI 142

Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
           +PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 143 DPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  272 bits (666), Expect = 2e-75
 Identities = 125/173 (72%), Positives = 155/173 (89%)
 Frame = +2

Query: 2   VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
           VLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++
Sbjct: 23  VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADIS 82

Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
            N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  +
Sbjct: 83  GNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCI 142

Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
           +PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 143 DPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  225 bits (549), Expect = 4e-61
 Identities = 101/173 (58%), Positives = 142/173 (82%)
 Frame = +2

Query: 2   VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
           +L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD+ 
Sbjct: 22  ILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIR 81

Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
            +K+AL++LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEELN D F  T+
Sbjct: 82  ADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTL 141

Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
           +PV+K L DA M K QI +IVLVGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 142 KPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 413 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 312
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 464 LLQDFFNGKELNKSINPDE 520
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 428 PVQYRGFEPYPSWHHGETSPLAP 360
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 81  PPPATPTWEVRTL 119
           PP   PTW VR L
Sbjct: 13  PPQEMPTWFVRWL 25


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 454 LGDTSGATHQYNIVDLSLIHLGITE 380
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 454 LGDTSGATHQYNIVDLSLIHLGITE 380
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,580
Number of Sequences: 336
Number of extensions: 3708
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)