Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0351
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 311 7e-86
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 308 4e-85
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 266 3e-72
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 217 2e-57
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 160 2e-40
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 130 2e-31
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 113 2e-26
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 104 1e-23
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.48
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.84
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.5
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.9
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.9
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 7.8
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 25 7.8
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 7.8
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 7.8
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 311 bits (763), Expect = 7e-86
Identities = 150/193 (77%), Positives = 168/193 (87%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
VLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+
Sbjct: 193 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDIT 252
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TM
Sbjct: 253 GNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTM 312
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 541
EPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 542 XXXXILHGDKSER 580
+L GD SE+
Sbjct: 373 VQAAVLTGDTSEK 385
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIETAG VMT LIKRNTTIP
Sbjct: 400 GIETAGGVMTPLIKRNTTIP 419
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 308 bits (757), Expect = 4e-85
Identities = 149/193 (77%), Positives = 168/193 (87%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
VLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+
Sbjct: 193 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDIT 252
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TM
Sbjct: 253 GNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTM 312
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 541
EPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 542 XXXXILHGDKSER 580
IL GD SE+
Sbjct: 373 VQAAILVGDTSEK 385
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIETAG VMT LIKRNTTIP
Sbjct: 400 GIETAGGVMTPLIKRNTTIP 419
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 266 bits (651), Expect = 3e-72
Identities = 122/173 (70%), Positives = 150/173 (86%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
VLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D++
Sbjct: 197 VLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDIS 256
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
+ RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T+
Sbjct: 257 DDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATI 316
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
+PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 317 DPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDE 369
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 217 bits (529), Expect = 2e-57
Identities = 98/190 (51%), Positives = 143/190 (75%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D+
Sbjct: 225 IVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVT 284
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
+ +A+ +L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T+
Sbjct: 285 KDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTL 344
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 541
+PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 345 KPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAA 403
Query: 542 XXXXILHGDK 571
+L G++
Sbjct: 404 VQAGVLSGEE 413
Score = 32.7 bits (71), Expect = 0.052
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIET G VMT LI RNT IP
Sbjct: 429 GIETTGGVMTKLIGRNTPIP 448
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 160 bits (388), Expect = 2e-40
Identities = 80/192 (41%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+
Sbjct: 237 VAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLS 296
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI----DFYTSITRARFEELNADLF 349
++ A++R+R A E+AK LSS ++ I + + I+RA+FE+L L
Sbjct: 297 KDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLV 356
Query: 350 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 529
R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 357 RRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVA 415
Query: 530 XXXXXXXXILHG 565
+L G
Sbjct: 416 IGAAIQGGVLSG 427
Score = 33.5 bits (73), Expect = 0.030
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIET G V T LI RNTTIP
Sbjct: 443 GIETLGGVFTRLINRNTTIP 462
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 130 bits (314), Expect = 2e-31
Identities = 66/173 (38%), Positives = 103/173 (59%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
V I D G + VSI+ G F +KST D +LG + D ++++F EFK KYK D+
Sbjct: 201 VAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVL 260
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
+N +A RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL L
Sbjct: 261 SNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLT 320
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 321 PPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 113 bits (273), Expect = 2e-26
Identities = 54/168 (32%), Positives = 99/168 (58%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
V++ + G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K D
Sbjct: 219 VVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPR 278
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
N R+L +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 279 KNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMA 338
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 505
+ V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 339 DLVTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 104 bits (249), Expect = 1e-23
Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Frame = +2
Query: 29 TFDVSILTIEDGIFEVKSTA-GDT-HLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALR 202
T + S L + I +++ A G T L G + + +++ F +K+ DL+ N RAL
Sbjct: 236 TVEGSSLGKKQNITRIRALASGFTLKLSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALA 295
Query: 203 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 382
RL R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L
Sbjct: 296 RLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKAL 355
Query: 383 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 356 KKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 162 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 287
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.84
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 120 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 10
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 416 RGFEPYPSWHHGETSPLAP 360
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 605 TSSNSRSCTSQTCHRAR*QPGQLHHKLRP 519
T S +R C S +C R Q +LH K++P
Sbjct: 381 TCSRNRLCYSISCPRRLEQQARLHLKVQP 409
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 275 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 433
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 121 QSHGEPLCPGVQEEIQKGPRYQQESS 198
QS G+PL PG + GP + SS
Sbjct: 599 QSIGDPLPPGAMANVSAGPSSVRSSS 624
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 156 LNSWTKWFTMRLSKSSPPKWVSPAVDF 76
LN K+ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 128 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 265
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 342 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 431
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 24 AVPSTCPSLPSRMVSSR*NPPPATPTW 104
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,997,568
Number of Sequences: 5004
Number of extensions: 63122
Number of successful extensions: 244
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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