Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0351
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 317 6e-87
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 311 4e-85
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 303 1e-82
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 234 6e-62
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 9e-44
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 144 8e-35
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 85 5e-17
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 80 1e-15
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.1
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.7
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.3
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.3
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 6.3
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 28 8.3
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 317 bits (778), Expect = 6e-87
Identities = 151/194 (77%), Positives = 170/194 (87%), Gaps = 2/194 (1%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
VLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+
Sbjct: 195 VLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDIT 254
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T
Sbjct: 255 PNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTT 314
Query: 362 EPVEKSLRDAKM--DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 535
EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE
Sbjct: 315 EPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYG 374
Query: 536 XXXXXXILHGDKSE 577
ILHGDK +
Sbjct: 375 AAVQAAILHGDKDD 388
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIETAG VM+ LIKRN+TIP
Sbjct: 404 GIETAGGVMSVLIKRNSTIP 423
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 311 bits (763), Expect = 4e-85
Identities = 148/193 (76%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
VLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+
Sbjct: 288 VLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDIT 347
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+
Sbjct: 348 PNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTL 407
Query: 362 EPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 538
EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE
Sbjct: 408 EPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGA 467
Query: 539 XXXXXILHGDKSE 577
ILHGDKSE
Sbjct: 468 AVQAAILHGDKSE 480
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
G+ETAG VMT IKRNTTIP
Sbjct: 496 GLETAGGVMTAAIKRNTTIP 515
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 303 bits (743), Expect = 1e-82
Identities = 142/196 (72%), Positives = 168/196 (85%), Gaps = 1/196 (0%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 178
VLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD+
Sbjct: 195 VLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDM 254
Query: 179 ATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 358
+ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S
Sbjct: 255 SKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSC 314
Query: 359 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 538
++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE
Sbjct: 315 LDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGA 374
Query: 539 XXXXXILHGDKSERCR 586
IL GDKS+ +
Sbjct: 375 AVQAAILSGDKSDEVK 390
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIETAG VMT LI+RN IP
Sbjct: 403 GIETAGEVMTKLIERNARIP 422
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 234 bits (572), Expect = 6e-62
Identities = 107/190 (56%), Positives = 147/190 (77%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++
Sbjct: 892 ILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIR 951
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 361
+ RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST+
Sbjct: 952 KDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTL 1011
Query: 362 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 541
+PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE
Sbjct: 1012 KPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAA 1071
Query: 542 XXXXILHGDK 571
+L G++
Sbjct: 1072 VQAGVLGGEE 1081
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIET G VMT LI RNT IP
Sbjct: 1097 GIETVGGVMTKLISRNTVIP 1116
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 173 bits (422), Expect = 9e-44
Identities = 87/193 (45%), Positives = 127/193 (65%), Gaps = 4/193 (2%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLF 349
+ AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL
Sbjct: 62 KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLI 121
Query: 350 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 529
T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 122 NRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVA 180
Query: 530 XXXXXXXXILHGD 568
+L GD
Sbjct: 181 IGAAIQGGVLAGD 193
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIET G V T LI RNTTIP
Sbjct: 208 GIETLGGVFTKLITRNTTIP 227
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 144 bits (348), Expect = 8e-35
Identities = 68/177 (38%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
V++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L
Sbjct: 224 VMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL- 282
Query: 182 TNKRALRRLRTACERAKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADL 346
T ++RLR E AK L+ + + +I++ SL EG + F +I+R FE +N DL
Sbjct: 283 TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDL 342
Query: 347 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 517
F+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 343 FKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 104 bits (250), Expect = 6e-23
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Frame = +2
Query: 74 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSS 247
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 248 STQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVL 427
+ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VL
Sbjct: 261 NNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVL 320
Query: 428 VGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
VGG R+PKVQ L EL K+IN DE
Sbjct: 321 VGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 92.7 bits (220), Expect = 3e-19
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 181
V+ D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+
Sbjct: 255 VVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVH 314
Query: 182 TNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRST 358
++ +A +L CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL +
Sbjct: 315 SSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLV 374
Query: 359 MEPVEKSLRDAKMDKAQIHDIV 424
P+ +L A+ K + ++V
Sbjct: 375 EAPLRSAL--AQSGKYSVKNVV 394
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 85.0 bits (201), Expect = 5e-17
Identities = 43/110 (39%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KY 166
VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+
Sbjct: 156 VLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKW 215
Query: 167 KKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 316
K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 216 KIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/87 (43%), Positives = 59/87 (67%)
Frame = +2
Query: 308 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 487
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 488 KELNKSINPDEXXXXXXXXXXXILHGD 568
+ +K++NPDE +L GD
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGGVLAGD 138
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 622 GIETAGSVMTTLIKRNTTIP 681
GIET G V T LI RNTTIP
Sbjct: 153 GIETLGGVFTKLITRNTTIP 172
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +2
Query: 395 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 571
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 407 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 520
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 139 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 231
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 5 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 118
LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1430 LITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 14 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 118
D G GT VS + +E+G +++ D H+ G F
Sbjct: 1526 DNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 2 VLIFDLGGGTFDVSILTIEDGIFEVK 79
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 8 IFDLGGGTFDVSILTIEDGIFEV 76
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 130 GEPLCPGVQEEIQKGPRYQQESS*AFAYCM 219
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 139 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 231
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 15 TSAAVPSTCPSLPSRMVSSR*NPPPATP 98
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 131 VNHFVQEFKRKYKKDLATNKRA-LRRLRTACERAKRTLS----SSTQASIEIDSLFEGID 295
VNH + +++K D+A++ A L + E+ K +++ S Q ++++ EGI+
Sbjct: 942 VNHLTKPILKEFKTDMASSINATLSHINRRFEKIKSSVTHKHRSLKQCVSQLNAFEEGIE 1001
Query: 296 FYTSITRARFEELNADLFRSTMEPVEKSLRDAK 394
+ L A ST+E VE+ L K
Sbjct: 1002 EELEWMDKALDALAAYKNLSTVEEVEQELSKYK 1034
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 139 LCPGVQEEIQKGPRYQQESS*AFAYCM 219
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 139 LCPGVQEEIQKGPRYQQESS*AFAYCM 219
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 388
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +2
Query: 161 KYKKDLATNKRALRRL-----RTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 325
K KKDLA K L L RT E KRT+ Q ++ + E T A F
Sbjct: 233 KTKKDLAETKNQLTALTSNEIRTINENTKRTVDGLEQKMAKVMADCEAARASQDATLAEF 292
Query: 326 EELNADLFRSTMEPVEKSLRDAKMDKAQ 409
E + + K + MD ++
Sbjct: 293 ENYKTRVHSVLKQQKTKPVHSPDMDPSE 320
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +2
Query: 125 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 304
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 305 SITRARFEELNADL 346
+ T R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 302 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 472
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,441,330
Number of Sequences: 59808
Number of extensions: 520767
Number of successful extensions: 4160
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4150
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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