Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0350
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           32   0.004
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   1.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.4  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +2

Query: 5   LQKIDEMEFNVLQPSPLNEKVLKEQKKKTQGNF*QSPQNV*QR*AREMGRSQTSRNG 175
           LQ+ D  E  +L+ +P ++ +L ++K K  G     P  V +R ARE  R +   NG
Sbjct: 15  LQQNDRREIIILRKNPQDDILLTKKKSKPGGKTAPQPVAVARRNARERNRVKQVNNG 71


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +1

Query: 61  KSIERAKEK--NSRKLLTESSKCMTKMSQRNG*ISNVKKWN 177
           K IERA     N  KLLT   +C T + +  G ++     N
Sbjct: 338 KGIERADSVTWNPHKLLTAPQQCSTLLLRHEGVLAEAHSTN 378


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 176 FHFLTFEIYPFLWLIFVI 123
           F+F   E +  LW++FVI
Sbjct: 20  FYFFETEQFTLLWVLFVI 37


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 122 HFEDSVKSFLEFFSFALSILF 60
           H   SVK F E F  +L +LF
Sbjct: 232 HLSKSVKLFNEVFGVSLLVLF 252


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 122 HFEDSVKSFLEFFSFALSILF 60
           H   SVK F E F  +L +LF
Sbjct: 250 HLSKSVKLFNEVFGVSLLVLF 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,770
Number of Sequences: 336
Number of extensions: 3718
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)