Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0348
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    32   0.018
AY324310-1|AAQ89695.1|  160|Anopheles gambiae insulin-like pepti...    26   1.2  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 31.9 bits (69), Expect = 0.018
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = -3

Query: 572 FVFPR-FVSSGLIQFYHLPRSLQLSL-KCFVIDPLPQ*PLILHFPLWSPVVHGVGSEGRN 399
           F FP  F + G+I++YH  + L++ L +  V++ L    LI  F L+  + H  G E R 
Sbjct: 381 FFFPMIFEALGIIEYYHPRKQLRIQLARIMVLNMLNLYSLI--FALFDKIAHMTG-ELRR 437

Query: 398 FQNENVETKNVPCFL 354
            +  N  +    CFL
Sbjct: 438 MKPTNFTSSASSCFL 452


>AY324310-1|AAQ89695.1|  160|Anopheles gambiae insulin-like peptide
           4 precursor protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 566 RQKPFERYVVPHERSEW 616
           RQKP+ R++VPH ++ +
Sbjct: 112 RQKPYHRFMVPHLKTRF 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,499
Number of Sequences: 2352
Number of extensions: 14110
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)