Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0348
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 94 4e-19
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 93 8e-19
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 93 8e-19
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 93 8e-19
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 93 8e-19
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 93 8e-19
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 93 1e-18
BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for IM... 62 2e-09
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 38 0.040
BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein. 30 6.1
AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens ... 30 6.1
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 93.9 bits (223), Expect = 4e-19
Identities = 48/117 (41%), Positives = 73/117 (62%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 11 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 70
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V TV+ HL Q G + K +++ VPHE SE
Sbjct: 71 VDNDQLRAIIEADPLTTTREVAEELNVDHSTVVRHLKQIG-KVKKLDKW-VPHELSE 125
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 12 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 71
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q G + K +++ VPHE +E
Sbjct: 72 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIG-KVKKLDKW-VPHELTE 126
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 97 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 156
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q G + K +++ VPHE +E
Sbjct: 157 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIG-KVKKLDKW-VPHELTE 211
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 339 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 398
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q G + K +++ VPHE +E
Sbjct: 399 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIG-KVKKLDKW-VPHELTE 453
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 339 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 398
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q G + K +++ VPHE +E
Sbjct: 399 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIG-KVKKLDKW-VPHELTE 453
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 339 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 398
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q G + K +++ VPHE +E
Sbjct: 399 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQIG-KVKKLDKW-VPHELTE 453
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 92.7 bits (220), Expect = 1e-18
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 263 R*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETK 442
R I+ +EF G AAET R IN +G G A E TV++WF++F G+ L+++ R ++
Sbjct: 339 RAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEERSGRPSE 398
Query: 443 VENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSE 613
V+N++L+ I+EAD +T E+A V+ TV+ HL Q E+ K +++ VPHE +E
Sbjct: 399 VDNDQLRAIIEADPLTTTREVAEELNVNHSTVVRHLKQI-EKVKKLDKW-VPHELTE 453
>BC010017-1|AAH10017.1| 292|Homo sapiens Unknown (protein for
IMAGE:2819902) protein.
Length = 292
Score = 61.7 bits (143), Expect = 2e-09
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +2
Query: 269 IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLETKVE 448
I+ +E G A ET R IN G G A E V++WF++F + L+++ ++V+
Sbjct: 189 IFLFELKMGHKAVETLRNINNTLGPGTANEHIVQWWFKKFCKEDKSLEDEKHSVWPSEVD 248
Query: 449 NEELKVIVEADQSQSTSEIA 508
N++LK ++EAD ++T E+A
Sbjct: 249 NDQLKALIEADPVKTTQEVA 268
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 37.5 bits (83), Expect = 0.040
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 308 ETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPR-GRLETKVENEEL---KVIVE 475
E + VYG +S V W RF+ G D++++ R GR T + E++ + ++E
Sbjct: 24 EITDALRKVYGDNAPKKSAVYKWITRFKKGRDDVEDEARSGRPSTSICEEKINLVRALIE 83
Query: 476 ADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYV 592
D+ + IA +S + LT+ + K R+V
Sbjct: 84 EDRRLTAETIANTTDISIGSAYTILTEKLKLSKLSTRWV 122
>BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein.
Length = 254
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +2
Query: 302 AAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPR-GRLETKVEN---EELKVI 469
A+ET + YG V + + V W +RF+ G D+++ R GR T + +++K +
Sbjct: 22 ASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVKDL 81
Query: 470 VEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQK 574
V +++ + +A + +TV + L + +K
Sbjct: 82 VCSNRQLTVRMMAEELNLDKETVRLILKENLNMRK 116
>AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ37770 fis, clone BRHIP2025448. ).
Length = 210
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +2
Query: 302 AAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPR-GRLETKVEN---EELKVI 469
A+ET + YG V + + V W +RF+ G D+++ R GR T + +++K +
Sbjct: 22 ASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHRTDDNIQKVKDL 81
Query: 470 VEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQK 574
V +++ + +A + +TV + L + +K
Sbjct: 82 VCSNRQLTVRMMAEELNLDKETVRLILKENLNMRK 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,040,010
Number of Sequences: 237096
Number of extensions: 1961928
Number of successful extensions: 4269
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4269
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -