Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0348
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    72   5e-15
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.7  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 71.7 bits (168), Expect = 5e-15
 Identities = 41/121 (33%), Positives = 67/121 (55%)
 Frame = +2

Query: 260 YR*IYEYEFYRGTIAAETARRINYVYGAGVATESTVRFWFQRFRSGNFDLQNQPRGRLET 439
           YR I  + F +G  A++  +++  VYG     E   + WF +FRSG+F L+++ R     
Sbjct: 8   YRHILLFYFRKGKNASQAHKKLCAVYGDEALKERQCQNWFDKFRSGDFSLKDEKRSGRPV 67

Query: 440 KVENEELKVIVEADQSQSTSEIAAGFGVSDKTVLIHLTQTGERQKPFERYVVPHERSEWE 619
           +V+++ +K I+++D+  +T EIA    VS   +  HL Q G  QK  + + VPHE  E  
Sbjct: 68  EVDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQK-LDTW-VPHELKEKH 125

Query: 620 L 622
           L
Sbjct: 126 L 126


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 370 FLVSTFSFWKFR 405
           +L STF FWK R
Sbjct: 21  YLTSTFDFWKSR 32


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 62  SVHIVCPRLGINRSAL 15
           SVHI  P+L  NR+ L
Sbjct: 281 SVHIKLPKLAANRAKL 296


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 422 RGRLETKVENEELKVIVEADQSQST 496
           RG+L TK+E+ E  + V++ +   T
Sbjct: 396 RGQLRTKIESGEGTIPVKSSEGIQT 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,665
Number of Sequences: 438
Number of extensions: 3973
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)