Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0345
(765 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24804-1|AAA18537.1| 160|Homo sapiens p23 protein. 75 2e-13
BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthas... 75 2e-13
BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine phosph... 49 2e-05
BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine phosph... 49 2e-05
BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein. 49 2e-05
AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein. 49 2e-05
BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase ... 42 0.002
BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase ... 42 0.002
>L24804-1|AAA18537.1| 160|Homo sapiens p23 protein.
Length = 160
Score = 75.4 bits (177), Expect = 2e-13
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +1
Query: 58 PPSVSWAQRNARIFLTFNVECEKP-DINIEPKSITFKGICEPEKKMHEVLIPLYAEVDPK 234
P S W R +F+ F VE K ++N E +TF + + H I L+ +DP
Sbjct: 3 PASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPN 62
Query: 235 KSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD-EDESGDDLDN-- 405
S R I L K + + WP LT ++ K +WL VDFN W+D ED+S +D+ N
Sbjct: 63 DSKHKRTDRSILCCLRKGESGQS-WPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFD 121
Query: 406 -----MNDMFSDKDMNI 441
MN+M D+D+++
Sbjct: 122 RFSEMMNNMGGDEDVDL 138
>BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthase 3
(cytosolic) protein.
Length = 160
Score = 75.4 bits (177), Expect = 2e-13
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +1
Query: 58 PPSVSWAQRNARIFLTFNVECEKP-DINIEPKSITFKGICEPEKKMHEVLIPLYAEVDPK 234
P S W R +F+ F VE K ++N E +TF + + H I L+ +DP
Sbjct: 3 PASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPN 62
Query: 235 KSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD-EDESGDDLDN-- 405
S R I L K + + WP LT ++ K +WL VDFN W+D ED+S +D+ N
Sbjct: 63 DSKHKRTDRSILCCLRKGESGQS-WPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFD 121
Query: 406 -----MNDMFSDKDMNI 441
MN+M D+D+++
Sbjct: 122 RFSEMMNNMGGDEDVDL 138
>BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein.
Length = 361
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ90417 fis, clone NT2RP3000171, weakly similar to
Mus musculus partial mRNA for B-IND1 protein (B-ind1
gene). ).
Length = 362
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ14515 fis, clone NT2RM1000800, weakly similar to
Mus musculus partial mRNA for B-IND1 protein. ).
Length = 362
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLK 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein.
Length = 370
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = +1
Query: 40 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEK--KMHEVLIP 210
M +QV P V WAQR+ ++L + + + P I+I + FK K ++E +
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
Query: 211 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESG 390
V P+ + + R + + + K KV + +W LT +K+ +L DF+RW DE ++
Sbjct: 61 FLDLVKPEPVYKLTQ-RQVNITVQK-KVSQ-WWERLTKQEKRPLFLAPDFDRWLDESDAE 117
Query: 391 DDL 399
+L
Sbjct: 118 MEL 120
>BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 205 IPLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD 375
I YA+V+ K S R I + K K ++ WP LT + K WL VDF+ W+D
Sbjct: 36 IEFYAKVNSKDSQDKRSSRSITCFVRKWK-EKVAWPRLTKEDIKPVWLSVDFDNWRD 91
>BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 42.3 bits (95), Expect = 0.002
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 205 IPLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD 375
I YA+V+ K S R I + K K ++ WP LT + K WL VDF+ W+D
Sbjct: 36 IEFYAKVNSKDSQDKRSSRSITCFVRKWK-EKVAWPRLTKEDIKPVWLSVDFDNWRD 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,835,505
Number of Sequences: 237096
Number of extensions: 1948598
Number of successful extensions: 4496
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4480
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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