Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0345
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061317-1|AAL28865.1|  184|Drosophila melanogaster LD23532p pro...   107   2e-23
AE014297-998|AAF54424.1|  184|Drosophila melanogaster CG16817-PA...   107   2e-23
AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p pro...    58   1e-08
AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA...    58   1e-08
BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p pro...    33   0.43 
AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-P...    33   0.43 
AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-P...    33   0.43 
BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p pro...    29   5.3  
AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA ...    29   5.3  

>AY061317-1|AAL28865.1|  184|Drosophila melanogaster LD23532p
           protein.
          Length = 184

 Score =  107 bits (256), Expect = 2e-23
 Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
 Frame = +1

Query: 34  LNMTSQVTPPSVSWAQRNARIFLTFNVECEKPDINIEPKSITFKGI--CEPEKKMHEVLI 207
           ++  + + PP VSWAQRN  I++  +VEC+  +  +  K+ TFKG+   +P KK +EV +
Sbjct: 1   MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLDPSKK-YEVTL 59

Query: 208 PLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDE--D 381
               EVDP+K    N GR +E  + K K   PYW SLT+DK K H+LK +F +W+DE  D
Sbjct: 60  NFLHEVDPEKVTSKNIGRCLEFTIPK-KAAGPYWSSLTTDKTKLHFLKANFAKWRDESDD 118

Query: 382 ESGDDLDN 405
           E GD  DN
Sbjct: 119 EEGDQKDN 126


>AE014297-998|AAF54424.1|  184|Drosophila melanogaster CG16817-PA
           protein.
          Length = 184

 Score =  107 bits (256), Expect = 2e-23
 Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
 Frame = +1

Query: 34  LNMTSQVTPPSVSWAQRNARIFLTFNVECEKPDINIEPKSITFKGI--CEPEKKMHEVLI 207
           ++  + + PP VSWAQRN  I++  +VEC+  +  +  K+ TFKG+   +P KK +EV +
Sbjct: 1   MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLDPSKK-YEVTL 59

Query: 208 PLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDE--D 381
               EVDP+K    N GR +E  + K K   PYW SLT+DK K H+LK +F +W+DE  D
Sbjct: 60  NFLHEVDPEKVTSKNIGRCLEFTIPK-KAAGPYWSSLTTDKTKLHFLKANFAKWRDESDD 118

Query: 382 ESGDDLDN 405
           E GD  DN
Sbjct: 119 EEGDQKDN 126


>AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p
           protein.
          Length = 371

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = +1

Query: 61  PSVSWAQRNARIFLTFNVECEKPDI-NIEPKSITFKGICEPEKKMHEVLIPL--YAEVDP 231
           P V W+Q    + L  +++  K  I +  P S+ F       + ++     L  YA +D 
Sbjct: 6   PFVYWSQTKQTLLLKVDLKDAKGAIADFSPVSVNFSANGHGARGVNAYKFELHFYALIDD 65

Query: 232 KKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDE 384
           + + +V     IE+ +   K++  +WP L +  +K HWLK+DF+RW+ ED+
Sbjct: 66  ENATFVVSDNKIELQI--RKLEPEWWPRLVATPQKPHWLKIDFDRWRTEDD 114


>AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA
           protein.
          Length = 371

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = +1

Query: 61  PSVSWAQRNARIFLTFNVECEKPDI-NIEPKSITFKGICEPEKKMHEVLIPL--YAEVDP 231
           P V W+Q    + L  +++  K  I +  P S+ F       + ++     L  YA +D 
Sbjct: 6   PFVYWSQTKQTLLLKVDLKDAKGAIADFSPVSVNFSANGHGARGVNAYKFELHFYALIDD 65

Query: 232 KKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDE 384
           + + +V     IE+ +   K++  +WP L +  +K HWLK+DF+RW+ ED+
Sbjct: 66  ENATFVVSDNKIELQI--RKLEPEWWPRLVATPQKPHWLKIDFDRWRTEDD 114


>BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p
           protein.
          Length = 580

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +1

Query: 58  PPSVSWAQRNARIFLTFNV--ECEKPDINIEPKSITFKGICEPEKKMHEVLI--PLYAEV 225
           PPS SW+Q +  + + FNV       + N+     T        K + EV+    LYA V
Sbjct: 293 PPSYSWSQTDNNVLIRFNVPSTASAKEFNVSGSKTTV-----VVKHLDEVIFDEELYASV 347

Query: 226 DPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKK 333
               S +      +E+ L K ++    WP L + KK
Sbjct: 348 GDDLSAFKLAENGLELSLTKAEIQN--WPRLFAQKK 381


>AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-PB,
           isoform B protein.
          Length = 580

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +1

Query: 58  PPSVSWAQRNARIFLTFNV--ECEKPDINIEPKSITFKGICEPEKKMHEVLI--PLYAEV 225
           PPS SW+Q +  + + FNV       + N+     T        K + EV+    LYA V
Sbjct: 293 PPSYSWSQTDNNVLIRFNVPSTASAKEFNVSGSKTTV-----VVKHLDEVIFDEELYASV 347

Query: 226 DPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKK 333
               S +      +E+ L K ++    WP L + KK
Sbjct: 348 GDDLSAFKLAENGLELSLTKAEIQN--WPRLFAQKK 381


>AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-PA,
           isoform A protein.
          Length = 580

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +1

Query: 58  PPSVSWAQRNARIFLTFNV--ECEKPDINIEPKSITFKGICEPEKKMHEVLI--PLYAEV 225
           PPS SW+Q +  + + FNV       + N+     T        K + EV+    LYA V
Sbjct: 293 PPSYSWSQTDNNVLIRFNVPSTASAKEFNVSGSKTTV-----VVKHLDEVIFDEELYASV 347

Query: 226 DPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKK 333
               S +      +E+ L K ++    WP L + KK
Sbjct: 348 GDDLSAFKLAENGLELSLTKAEIQN--WPRLFAQKK 381


>BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 LIEVLLAKEKVDEPYWPSLTSDKKK--HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 432
           L++ +L  E+ ++  W      KKK      K +   W DE+E  +D D   D FS+ D
Sbjct: 205 LLDFVLDDEE-EKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDNFSEDD 262


>AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 262 LIEVLLAKEKVDEPYWPSLTSDKKK--HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 432
           L++ +L  E+ ++  W      KKK      K +   W DE+E  +D D   D FS+ D
Sbjct: 205 LLDFVLDDEE-EKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDNFSEDD 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,976,582
Number of Sequences: 53049
Number of extensions: 555853
Number of successful extensions: 1699
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)