Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0340
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.98 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.98 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.0  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   6.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   6.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 233 PRMSALSISIFTRICYIHFINYNFLV 156
           PR S+L   I T+  ++ F++YN  V
Sbjct: 174 PRKSSLVQLILTQAIFLMFVSYNIYV 199


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 233 PRMSALSISIFTRICYIHFINYNFLV 156
           PR S+L   I T+  ++ F++YN  V
Sbjct: 100 PRKSSLVQLILTQAIFLMFVSYNIYV 125


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 510 TTQFISQKKNRHIAFYKPDKYSNGQSDKF 596
           T +F   KKN + +FY  DK +  +S +F
Sbjct: 169 TGRFTFHKKNLYYSFYISDKAARPRSLQF 197


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 11  TVYVISEIEINFNYFIERNKNLFIN 85
           T Y++  I+ N + F++RN   F N
Sbjct: 357 TTYLVILIQFNNSDFVQRNSTEFDN 381


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = -2

Query: 82  NKQIFISFNKIIEINFYFTDNI 17
           N+++FISF+KI  ++ + + ++
Sbjct: 216 NRRVFISFSKICYLHQHLSKSV 237


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = -2

Query: 82  NKQIFISFNKIIEINFYFTDNI 17
           N+++FISF+KI  ++ + + ++
Sbjct: 234 NRRVFISFSKICYLHQHLSKSV 255


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 454 DCFTLFERISQ*DLKHFHTLHSSYLKKKIDTLR 552
           DC+ LF      +L   +   + Y K  IDTL+
Sbjct: 71  DCYMLFREPQLHNLCRKNCFTTDYFKGCIDTLQ 103


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 454 DCFTLFERISQ*DLKHFHTLHSSYLKKKIDTLR 552
           DC+ LF      +L   +   + Y K  IDTL+
Sbjct: 71  DCYMLFREPQLHNLCRKNCFTTDYFKGCIDTLQ 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,853
Number of Sequences: 336
Number of extensions: 2974
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)