Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0340
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   5.0  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.6  

>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -1

Query: 629 RLVDMKIKF*MKLIGLSVGVLVRFVKRNVSIFFLR 525
           + V+M ++F  KL  L +G+  RF+ + VS FFL+
Sbjct: 220 QFVNMMVQFSPKLSRL-LGI--RFIDKEVSAFFLK 251


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 573 SNGQSDKFHLKFYFHIHQT*VNSILLII 656
           S+ Q +KF L+F+F I Q   +S L +I
Sbjct: 4   SSFQFNKFFLEFFFDIFQLYFHSFLGLI 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,113
Number of Sequences: 2352
Number of extensions: 12073
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)