Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0340
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065240-1|AAH65240.1|  915|Homo sapiens LRAP protein protein.         33   0.92 
AF191545-1|AAG28383.1|  960|Homo sapiens aminopeptidase protein.       33   0.92 
AB109031-1|BAC78818.1|  960|Homo sapiens leukocyte-derived argin...    33   0.92 
BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse...    30   8.6  
BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse...    30   8.6  
AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein.     30   8.6  

>BC065240-1|AAH65240.1|  915|Homo sapiens LRAP protein protein.
          Length = 915

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +1

Query: 325 IKFMYRKYYTFDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAWSDCFTLFERI 480
           + ++   Y+  D R I  +     LKRYL   F PV+ +++WSD  ++++R+
Sbjct: 655 LSYLESFYHMMDRRNISDIS--ENLKRYLLQYFKPVIDRQSWSDKGSVWDRM 704


>AF191545-1|AAG28383.1|  960|Homo sapiens aminopeptidase protein.
          Length = 960

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +1

Query: 325 IKFMYRKYYTFDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAWSDCFTLFERI 480
           + ++   Y+  D R I  +     LKRYL   F PV+ +++WSD  ++++R+
Sbjct: 700 LSYLESFYHMMDRRNISDIS--ENLKRYLLQYFKPVIDRQSWSDKGSVWDRM 749


>AB109031-1|BAC78818.1|  960|Homo sapiens leukocyte-derived arginine
           aminopeptidase long form variant protein.
          Length = 960

 Score = 33.1 bits (72), Expect = 0.92
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +1

Query: 325 IKFMYRKYYTFDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAWSDCFTLFERI 480
           + ++   Y+  D R I  +     LKRYL   F PV+ +++WSD  ++++R+
Sbjct: 700 LSYLESFYHMMDRRNISDIS--ENLKRYLLQYFKPVIDRQSWSDKGSVWDRM 749


>BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse)
           protein.
          Length = 1485

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 295 RKTS*INTKIIKFMYRKYYT---FDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAW 450
           +K S  + K+I+ +Y K      F +R+I  L    YL+ YL+  ++P +  KA+
Sbjct: 36  KKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAY 90


>BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse)
           protein.
          Length = 1485

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 295 RKTS*INTKIIKFMYRKYYT---FDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAW 450
           +K S  + K+I+ +Y K      F +R+I  L    YL+ YL+  ++P +  KA+
Sbjct: 36  KKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAY 90


>AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein.
          Length = 1521

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +1

Query: 295 RKTS*INTKIIKFMYRKYYT---FDLRRIHSL*L*NYLKRYLFFKFNPVLPKKAW 450
           +K S  + K+I+ +Y K      F +R+I  L    YL+ YL+  ++P +  KA+
Sbjct: 72  KKKSPFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAY 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,993,994
Number of Sequences: 237096
Number of extensions: 1298270
Number of successful extensions: 1687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)