Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0338
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           25   1.8  
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    24   5.6  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   9.8  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   9.8  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   9.8  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   9.8  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   9.8  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 94  CVTHEQPNSRKRSWSLEECSICFEIMLKDQELMALPC 204
           C +  QP+    +  L+EC  C E  L++++L    C
Sbjct: 122 CNSQVQPSVITATGFLKECYCCRESFLRERQLQLTHC 158


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 112 VVHVSHTIVELFCPCHK 62
           VV +SHT+  +  P HK
Sbjct: 106 VVRISHTVFHVLVPVHK 122


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 165 LEADGAFFQRPRALTAVGLFMCHTL 91
           +  DG   Q PR+LT +  F  H +
Sbjct: 47  ISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 165 LEADGAFFQRPRALTAVGLFMCHTL 91
           +  DG   Q PR+LT +  F  H +
Sbjct: 47  ISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 165 LEADGAFFQRPRALTAVGLFMCHTL 91
           +  DG   Q PR+LT +  F  H +
Sbjct: 47  ISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 165 LEADGAFFQRPRALTAVGLFMCHTL 91
           +  DG   Q PR+LT +  F  H +
Sbjct: 47  ISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 165 LEADGAFFQRPRALTAVGLFMCHTL 91
           +  DG   Q PR+LT +  F  H +
Sbjct: 47  ISVDGVAIQEPRSLTIMHQFPLHKI 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,918
Number of Sequences: 2352
Number of extensions: 13722
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)