Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0338
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 55 5e-08
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 52 4e-07
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 52 4e-07
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 52 6e-07
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 51 7e-07
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 49 4e-06
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 46 2e-05
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 46 4e-05
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 44 1e-04
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 42 3e-04
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 40 0.002
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 39 0.004
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 38 0.007
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 38 0.010
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 38 0.010
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 37 0.013
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 36 0.030
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 36 0.030
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 35 0.069
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 33 0.28
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 32 0.37
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 32 0.37
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 31 0.64
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 4.5
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 4.5
Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 28 6.0
U43282-6|AAA83617.1| 249|Caenorhabditis elegans Hypothetical pr... 28 6.0
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 28 6.0
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 7.9
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 7.9
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 57.6 bits (133), Expect = 9e-09
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKD 279
C IC E M D LPC+H FH+ C+ W Q +QTCP CR D
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTD 335
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 56.8 bits (131), Expect = 1e-08
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
+C+ CF+ D+++ AL C H FH CI PWL+ K +CP CR+
Sbjct: 237 QCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCPVCRQ 280
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
EC+IC E M +E + C FHS+C WL EK+ CP CRK
Sbjct: 441 ECAICLEEMYNFKETIKCECRRRFHSKCATKWLNEKRECPTCRK 484
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
CSICFE + ++ ++ A+ C H +H CI W+ K+ CP+CR+
Sbjct: 13 CSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSCRR 55
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSAD 318
E C IC E + EL L C H FH +C+ PWL K+ CP C+ D K +V S +
Sbjct: 315 ERCVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQFDVVYKHYPKVDSPE 373
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKD 279
+C++C + + LPC H +H CI PWL E +TCP C+ D
Sbjct: 226 DCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKND 270
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
EC+IC + M +E + C FH +C WL EK+ CP CRK
Sbjct: 1025 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCRK 1068
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
EC+IC + M +E + C FH +C WL EK+ CP CRK
Sbjct: 1059 ECAICLDEMTNFKETIKCQCRRRFHLECATKWLNEKRECPTCRK 1102
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
EC+IC + M +E + C FH +C WL EK+ CP CRK
Sbjct: 734 ECAICLDEMTNFKETIKCECRRRFHLKCATKWLNEKRECPTCRK 777
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 51.2 bits (117), Expect = 7e-07
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEV 306
EC+IC + + LPC H+FH +C+ WL + TCP+C + S ++ +
Sbjct: 94 ECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSCLEPVDSTILSSL 147
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 273
+ C +C+E++ + L PC+H FH C+M WL + +CP CR
Sbjct: 333 DRCVVCWELLGTSRRL---PCSHQFHDWCLMWWLAQDSSCPTCR 373
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 273
+ C +C+E++ + L PC+H FH C+M WL + +CP CR
Sbjct: 333 DRCVVCWELLGTSRRL---PCSHQFHDWCLMWWLAQDSSCPTCR 373
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWL-QEKQTCPNCRK 276
+ C+IC E ++L LPC H FH CI WL Q ++ CP C++
Sbjct: 245 DTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKR 290
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 187 LMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSAD 318
++ +PC H FH C+ WL+ +QTCP CR+ K KEV+ +
Sbjct: 106 VIVMPCKHRFHYFCLTLWLEAQQTCPTCRQKV--KTDKEVEEEE 147
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 139 LEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSAD 318
L C++C E M D ++A+ C H+FH++C+ W TCP CR +V+ E + D
Sbjct: 257 LPTCAVCLERM--DDSVLAILCNHSFHARCLEQWAD--NTCPVCRYVQSPEVVAEQRCND 312
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKD 279
+ C++C + + L C H FH +CI WL + CP CR++
Sbjct: 431 DTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREE 476
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 148 CSICFEIM-LKDQELMALPCTHNFHSQCIMPWLQEK--QTCPNCR 273
C+ C + LKD+ L AL C+H FH +C+ +L ++ QTCP CR
Sbjct: 374 CNFCGQRYGLKDESLQALRCSHIFHEKCLHTYLLQRTDQTCPKCR 418
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 44.8 bits (101), Expect = 6e-05
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCPNC 270
+EC +C E M+K+Q+ + C +H+ C+ W + K+ CP C
Sbjct: 898 KECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTC 941
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 264
ECSIC E + ++ LPC +H QCI W + K CP
Sbjct: 144 ECSICLEDLEAGHKIARLPCLCIYHKQCIDDWFKRKNCCP 183
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNC 270
C+ICF I +K+ E PC H FH C+ WL K CP C
Sbjct: 604 CAICF-IEMKE-EARITPCKHYFHGPCLRKWLAVKMVCPLC 642
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 145 ECSICFE-IMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNC 270
EC IC E I L++ + CT +HS C WL +K TCP C
Sbjct: 527 ECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCPKC 569
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSADW 321
+ C++C +L+ + L CTH F CI WL +K TCP CR ++V K+ + DW
Sbjct: 335 QPCAVCHGDLLQP---IKLECTHVFCKFCIETWLDQKSTCPICR----AEVTKDADN-DW 386
Query: 322 IN 327
N
Sbjct: 387 KN 388
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 145 ECSICFEIMLKDQE-LMALPCTHNFHSQCIMPWLQEKQTCPNC 270
EC +C E M ++ E L L C +H+ C W + K+ CP C
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICPTC 560
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 112 PNSRKRSWSLE--ECSICFEIMLKDQE-LMALPCTHNFHSQCIMPWLQEKQTCPNC 270
P S+K S LE EC +C E M+++ E L C +H+ C W + K+ CP C
Sbjct: 878 PESQK-SDDLEDKECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTC 932
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMAL--PCTHNFHSQCIMPWLQEKQTCPNCRK 276
ECSICF Q L L C H F C+ WL+ + TCP CR+
Sbjct: 33 ECSICFFDFDDFQHLPKLLENCGHTFCYSCLFDWLKSQDTCPMCRE 78
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 139 LEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRKD 279
+EEC C + ++ C H+FH C+ W+++ CP C+KD
Sbjct: 58 MEECLRCQSEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCPLCQKD 104
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 148 CSICF-EIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCPNCRK 276
C+IC EIM D+ + CT + H +C P LQ+ CP C++
Sbjct: 655 CAICHDEIMTNDKSAIKCERCTKSIHEKCAAPLLQQSVMCPTCKQ 699
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCPNCRK 276
C IC EI+ + E + CT +H CI WL+ CP C +
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCPNCRK 276
C IC EI+ + E + CT +H CI WL+ CP C +
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIM-PWLQEKQTCPNCRKDA*SK 291
C +C E++ +M C H F QCI+ +++ TCP CR++ SK
Sbjct: 162 CDVCQELI--QGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSK 208
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 148 CSICFE-IMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
C IC + ++ ++ + C FH C W +EK CP C +
Sbjct: 138 CLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNR 181
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE--KQTCPNCRKD 279
+C+IC QE C H+F CI W+ + + +CP CRKD
Sbjct: 67 QCTICLSTRFS-QECRIEGCNHSFCFSCISEWVCQSLRPSCPMCRKD 112
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +1
Query: 139 LEECSICFEIMLKDQELMALP------CTHNFHSQCIMPWLQ--EKQTCPNCRKD 279
+E+C+IC +M Q+ LP C + FHS C+ W + + TCP CR +
Sbjct: 1392 VEDCTIC--MMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRNN 1444
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = +1
Query: 136 SLEECSICFEIML-KDQELMALPCTHNFHSQCIMP-------WLQEKQTCPNCRKD 279
SL C +CFE+ +++ LPC HNF CI +L + CP CR++
Sbjct: 20 SLITCEVCFEVFNHENRPPKLLPCGHNFCESCIFSLCLHQEYYLLDSIKCPTCRRE 75
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 175 KDQELMALPCTHNFHSQCIMPW--LQEKQTCPNCRK 276
+D++L L C H FH CI W + + QTCP C++
Sbjct: 324 EDEKLYKLSCGHVFHEFCIRGWVVVGKLQTCPYCKE 359
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCP 264
EC LKD+ +A C H FH CI WL+ +Q CP
Sbjct: 57 ECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCP 97
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALP-CTHNFHSQCIMPWLQEKQTCP 264
EC LKD+ +A C H FH CI WL+ +Q CP
Sbjct: 48 ECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCP 88
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 145 ECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 273
+C ICF++ + + L C H+ + C WL CP CR
Sbjct: 25 QCHICFQV--NHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCR 65
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 34.7 bits (76), Expect = 0.069
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
C+IC++I+++ L C H+F +CI L + CP+C++
Sbjct: 100 CTICYDIIVEPHTLR---CQHSFCKKCIDQCLPLTRKCPSCQQ 139
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 106 EQPNSRKR-SWSLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQ--TCPNCR 273
E P S++ EECS+C ++ L C H F CI+ WL + CP C+
Sbjct: 26 ESPQSKEEIDEPEEECSVCKNEIIDTTSLS--DCCHEFCYDCIVGWLTKGSGPFCPMCK 82
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWL-----QEKQTCPNCRKD 279
C++C + D L+ C H FH CI W+ Q + CP CR+D
Sbjct: 83 CNMC-KFPGDDCPLVLGICRHAFHRHCIDKWIAAPTNQPRAQCPLCRQD 130
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 32.3 bits (70), Expect = 0.37
Identities = 9/39 (23%), Positives = 22/39 (56%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 264
C++C ++ ++ +PC H F ++C+ ++ + CP
Sbjct: 5 CAVCNDLKPCEEATQLIPCLHTFCTKCLKKSTKKMRVCP 43
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 97 VTHEQPNSRKRSWSLEECSICFEIMLKDQELMALPCTHNFH-SQCIMPWLQ--EKQTCPN 267
+T P R + S EC++CFE+ + L C +C+ W + K +CP
Sbjct: 257 ITDRHPRRRNQDGSHGECTMCFEVPV--SPLGCNNCLQIIGCEECVDIWYRSSSKPSCPL 314
Query: 268 CRK 276
CR+
Sbjct: 315 CRR 317
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 136 SLEECSICFEIMLKDQELMALPCTHNFHSQC 228
+L +C +CFE + + PC+H F C
Sbjct: 180 TLYDCQVCFESQMGQHCIKFQPCSHVFCKSC 210
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 100 THEQPNSRKRSWSLEECSIC-FEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCRK 276
T + S + S +EC IC + +D+ + C H CI+ + E T P C
Sbjct: 174 TKKLTESNAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPICPF 233
Query: 277 D 279
D
Sbjct: 234 D 234
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 136 SLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE----KQTCPNCRKDA*SKVIKE 303
+++ C IC E L+ C ++H+ CI P L E + +CP C ++ I++
Sbjct: 327 NMDYCRICKET---SNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEK 383
Query: 304 VKSADWINVFF 336
+ S W + +
Sbjct: 384 ILSWRWKEISY 394
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 136 SLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE----KQTCPNCRKDA*SKVIKE 303
+++ C IC E L+ C ++H+ CI P L E + +CP C ++ I++
Sbjct: 327 NMDYCRICKET---SNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEK 383
Query: 304 VKSADWINVFF 336
+ S W + +
Sbjct: 384 ILSWRWKEISY 394
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCP 264
C ICF L + L C H FH C+ L+ + P
Sbjct: 3517 CVICFTERLGAAPCIRLGCGHMFHFHCVRMILERRWNGP 3555
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 136 SLEECSICFEIMLKDQELMALPCTHNFHSQCIMPWLQE----KQTCPNCRKDA*SKVIKE 303
+++ C IC E L+ C ++H+ CI P L E + +CP C ++ I++
Sbjct: 327 NMDYCRICKET---SNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEK 383
Query: 304 VKSADWINVFF 336
+ S W + +
Sbjct: 384 ILSWRWKEISY 394
>Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical
protein K10D6.2a protein.
Length = 340
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 94 CVTHEQPNSRKRSWSLEECSICFEIMLKDQELMALPCTHNFHSQ 225
C P+S K S+ EE S C L A+ TH FH++
Sbjct: 294 CFESTHPSSIKMSFHTEERSHCSTTNLYHHNKPAIGRTHRFHTE 337
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 148 CSICFEIMLKDQELMALPCTHNFHSQCIMPWLQEKQTCPNCR 273
C++C + + E + C H++ CI L + CP CR
Sbjct: 8 CAVCLDFFV---EPCIIECGHSYCRFCIESHLNINEKCPLCR 46
>U43282-6|AAA83617.1| 249|Caenorhabditis elegans Hypothetical
protein T22E5.6 protein.
Length = 249
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 315 SAFYFLYHLRSGVLPAIGARLFLLKPGHDALRVKIVGAR*GHQ 187
S F+F + G+LP IGA FL + DA + ++ G HQ
Sbjct: 184 SGFWFFF--LGGLLPFIGALYFLFREQMDASKTRLRGLINRHQ 224
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 136 SLEECSICFEIMLKDQELMALPCTHNFHSQC 228
+L +C +C++ + + PC+H F QC
Sbjct: 182 TLFDCEVCYDSQMGQHCIKFQPCSHVFCKQC 212
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWL-----QEKQTCPNC 270
E C IC E + L+ C +FH+ CI P L +E +CP C
Sbjct: 318 EFCKICKET---ENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 362
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 142 EECSICFEIMLKDQELMALPCTHNFHSQCIMPWL-----QEKQTCPNC 270
E C IC E + L+ C +FH+ CI P L +E +CP C
Sbjct: 318 EFCKICKET---ENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,850,372
Number of Sequences: 27780
Number of extensions: 277451
Number of successful extensions: 684
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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