Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0336
(559 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022394-1|AAY54810.1| 140|Drosophila melanogaster IP05394p pro... 38 0.012
AE014296-1746|AAF50203.2| 120|Drosophila melanogaster CG14167-P... 38 0.012
BT022406-1|AAY54822.1| 134|Drosophila melanogaster IP05494p pro... 34 0.11
AE014296-1744|AAF50205.1| 154|Drosophila melanogaster CG14173-P... 31 1.1
BT010039-1|AAQ22508.1| 567|Drosophila melanogaster LD39302p pro... 30 2.4
AY069458-1|AAL39603.1| 552|Drosophila melanogaster LD18435p pro... 30 2.4
AE014297-3494|AAO41599.1| 552|Drosophila melanogaster CG31137-P... 30 2.4
AE014297-3493|AAF56258.2| 552|Drosophila melanogaster CG31137-P... 30 2.4
AE014297-3492|AAF56259.2| 552|Drosophila melanogaster CG31137-P... 30 2.4
AE014297-3491|AAN13986.1| 567|Drosophila melanogaster CG31137-P... 30 2.4
BT029097-1|ABJ17030.1| 879|Drosophila melanogaster IP13351p pro... 29 5.6
AE013599-1458|AAM68672.1| 879|Drosophila melanogaster CG30047-P... 29 5.6
U24095-1|AAA65109.1| 100|Drosophila melanogaster L71-1 protein. 28 7.4
U23836-1|AAA74176.1| 100|Drosophila melanogaster L71-1 protein. 28 7.4
BT001344-1|AAN71099.1| 545|Drosophila melanogaster AT23187p pro... 28 7.4
AY043267-1|AAK85705.1| 566|Drosophila melanogaster CCR4 protein. 28 7.4
AE014297-3495|AAF56256.2| 545|Drosophila melanogaster CG31137-P... 28 7.4
AE014296-2553|AAF49602.1| 100|Drosophila melanogaster CG16931-P... 28 7.4
>BT022394-1|AAY54810.1| 140|Drosophila melanogaster IP05394p
protein.
Length = 140
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 118 CGRHLANARMILC---YDTVEKRAQSYLDANIISAGDLSSWPGLSSQYAKTRAFALAEKS 288
CGR L LC ++ + KR ++ N I + S L + + + +
Sbjct: 54 CGRKLPETLSKLCVYGFNAMTKRTLDPVNFNQIDGFEDRS---LLERLLSDSSVQMLKTR 110
Query: 289 KRGPGLFDECCLKPCYTYDLLSYC 360
+ G+FDECCLK C ++L YC
Sbjct: 111 RLRDGVFDECCLKSCTMDEVLRYC 134
>AE014296-1746|AAF50203.2| 120|Drosophila melanogaster CG14167-PA
protein.
Length = 120
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 118 CGRHLANARMILC---YDTVEKRAQSYLDANIISAGDLSSWPGLSSQYAKTRAFALAEKS 288
CGR L LC ++ + KR ++ N I + S L + + + +
Sbjct: 34 CGRKLPETLSKLCVYGFNAMTKRTLDPVNFNQIDGFEDRS---LLERLLSDSSVQMLKTR 90
Query: 289 KRGPGLFDECCLKPCYTYDLLSYC 360
+ G+FDECCLK C ++L YC
Sbjct: 91 RLRDGVFDECCLKSCTMDEVLRYC 114
>BT022406-1|AAY54822.1| 134|Drosophila melanogaster IP05494p
protein.
Length = 134
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 301 GLFDECCLKPCYTYDLLSYC 360
G+FDECCLK C ++L YC
Sbjct: 109 GVFDECCLKSCTMDEVLRYC 128
>AE014296-1744|AAF50205.1| 154|Drosophila melanogaster CG14173-PA
protein.
Length = 154
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 301 GLFDECCLKPCYTYDLLSYC 360
G++DECC+K C +L YC
Sbjct: 132 GVYDECCVKTCSYLELAIYC 151
>BT010039-1|AAQ22508.1| 567|Drosophila melanogaster LD39302p
protein.
Length = 567
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 18 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 57
>AY069458-1|AAL39603.1| 552|Drosophila melanogaster LD18435p
protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 3 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 42
>AE014297-3494|AAO41599.1| 552|Drosophila melanogaster CG31137-PF,
isoform F protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 3 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 42
>AE014297-3493|AAF56258.2| 552|Drosophila melanogaster CG31137-PE,
isoform E protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 3 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 42
>AE014297-3492|AAF56259.2| 552|Drosophila melanogaster CG31137-PA,
isoform A protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 3 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 42
>AE014297-3491|AAN13986.1| 567|Drosophila melanogaster CG31137-PC,
isoform C protein.
Length = 567
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 121 GRHLANARMILCYDTVEKRAQSYLDANIISAGDLSSWPGL 240
G H +R YD+ +R Q +L I+AG ++W GL
Sbjct: 18 GNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGL 57
>BT029097-1|ABJ17030.1| 879|Drosophila melanogaster IP13351p
protein.
Length = 879
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 390 YYWLIFIQTSSD*SFLVFAYVMFNFHLKLYQQI 488
YYW++ +Q FL F Y+ + F L + +
Sbjct: 549 YYWVVLVQVLQLVPFLYFCYLFYTFLLVFFPML 581
>AE013599-1458|AAM68672.1| 879|Drosophila melanogaster CG30047-PA
protein.
Length = 879
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 390 YYWLIFIQTSSD*SFLVFAYVMFNFHLKLYQQI 488
YYW++ +Q FL F Y+ + F L + +
Sbjct: 549 YYWVVLVQVLQLVPFLYFCYLFYTFLLVFFPML 581
>U24095-1|AAA65109.1| 100|Drosophila melanogaster L71-1 protein.
Length = 100
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 172 SRQCHSRVSCVRWPNDVRNRPEDFPQFSTLCRGRQHSPAPQRSGNTAETSWYSCLG 5
+R+C S CVR N+ +R D P F+ CR R R+ E S +CLG
Sbjct: 29 ARRCES---CVRRLNNTIDR--DLPLFNRECRQRTELSWRWRNVGRCELSKLNCLG 79
>U23836-1|AAA74176.1| 100|Drosophila melanogaster L71-1 protein.
Length = 100
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 172 SRQCHSRVSCVRWPNDVRNRPEDFPQFSTLCRGRQHSPAPQRSGNTAETSWYSCLG 5
+R+C S CVR N+ +R D P F+ CR R R+ E S +CLG
Sbjct: 29 ARRCES---CVRRLNNTIDR--DLPLFNRECRQRTELSWRWRNVGRCELSKLNCLG 79
>BT001344-1|AAN71099.1| 545|Drosophila melanogaster AT23187p
protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 157 YDTVEKRAQSYLDANIISAGDLSSWPGL 240
YD+ +R Q +L I+AG ++W GL
Sbjct: 8 YDSANRRQQIFLSQEDIAAGKKTNWSGL 35
>AY043267-1|AAK85705.1| 566|Drosophila melanogaster CCR4 protein.
Length = 566
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 157 YDTVEKRAQSYLDANIISAGDLSSWPGL 240
YD+ +R Q +L I+AG ++W GL
Sbjct: 8 YDSANRRQQIFLSQEDIAAGKKTNWSGL 35
>AE014297-3495|AAF56256.2| 545|Drosophila melanogaster CG31137-PB,
isoform B protein.
Length = 545
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 157 YDTVEKRAQSYLDANIISAGDLSSWPGL 240
YD+ +R Q +L I+AG ++W GL
Sbjct: 8 YDSANRRQQIFLSQEDIAAGKKTNWSGL 35
>AE014296-2553|AAF49602.1| 100|Drosophila melanogaster CG16931-PA
protein.
Length = 100
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 172 SRQCHSRVSCVRWPNDVRNRPEDFPQFSTLCRGRQHSPAPQRSGNTAETSWYSCLG 5
+R+C S CVR N+ +R D P F+ CR R R+ E S +CLG
Sbjct: 29 ARRCES---CVRRLNNTIDR--DLPLFNRECRQRTELSWRWRNVGRCELSKLNCLG 79
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,597,781
Number of Sequences: 53049
Number of extensions: 418912
Number of successful extensions: 1072
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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