Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0331
(741 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 25 1.9
EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. 23 9.9
EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519376-1|ABP68485.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein. 23 9.9
EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519373-1|ABP68482.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein. 23 9.9
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519367-1|ABP68476.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein. 23 9.9
EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein. 23 9.9
EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein. 23 9.9
EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519361-1|ABP68470.1| 497|Anopheles gambiae LRIM1 protein. 23 9.9
EF519360-1|ABP68469.1| 499|Anopheles gambiae LRIM1 protein. 23 9.9
EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519358-1|ABP68467.1| 497|Anopheles gambiae LRIM1 protein. 23 9.9
EF519357-1|ABP68466.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein. 23 9.9
EF519355-1|ABP68464.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein. 23 9.9
EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein. 23 9.9
EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein. 23 9.9
EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein. 23 9.9
EF519350-1|ABP68459.1| 421|Anopheles gambiae LRIM1 protein. 23 9.9
EF519349-1|ABP68458.1| 486|Anopheles gambiae LRIM1 protein. 23 9.9
EF519348-1|ABP68457.1| 503|Anopheles gambiae LRIM1 protein. 23 9.9
EF519347-1|ABP68456.1| 470|Anopheles gambiae LRIM1 protein. 23 9.9
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 9.9
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 23 9.9
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 9.9
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.4 bits (53), Expect = 1.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 560 WVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 447
+V+AN L V FLL K L + W+ + S+DE
Sbjct: 928 FVMANALFVLVIFLLQLKKQELHIEWWFNVKNKISFDE 965
>EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519376-1|ABP68485.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519373-1|ABP68482.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein.
Length = 452
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 28 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 63
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519367-1|ABP68476.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein.
Length = 496
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519361-1|ABP68470.1| 497|Anopheles gambiae LRIM1 protein.
Length = 497
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519360-1|ABP68469.1| 499|Anopheles gambiae LRIM1 protein.
Length = 499
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519358-1|ABP68467.1| 497|Anopheles gambiae LRIM1 protein.
Length = 497
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519357-1|ABP68466.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein.
Length = 500
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519355-1|ABP68464.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein.
Length = 470
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein.
Length = 448
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519350-1|ABP68459.1| 421|Anopheles gambiae LRIM1 protein.
Length = 421
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519349-1|ABP68458.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519348-1|ABP68457.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>EF519347-1|ABP68456.1| 470|Anopheles gambiae LRIM1 protein.
Length = 470
Score = 23.0 bits (47), Expect = 9.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 612 SLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAP 719
SL+ R W+V++ L+G L + A LAP
Sbjct: 43 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAP 78
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.0 bits (47), Expect = 9.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 237 WKFETSKYYVTIIDAPG 287
W +E K+ T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.0 bits (47), Expect = 9.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 676 RENASLKLSMPSWHLPAPLTSP 741
RE+ L L WHL P T P
Sbjct: 200 REDIGLSLHHWHWHLVYPATGP 221
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.9
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 439 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 317
T R AS S P IPA + PVPA QS +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,046
Number of Sequences: 2352
Number of extensions: 18663
Number of successful extensions: 64
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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