Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0331
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 380 e-106
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 380 e-106
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 316 1e-86
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 244 1e-83
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 216 2e-56
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 216 2e-56
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 212 3e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 1e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 96 2e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 96 2e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 96 2e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 93 1e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 93 1e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-06
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 9e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.006
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.010
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.092
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.092
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.37
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.6
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 29 2.6
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 2.6
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 2.6
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 29 2.6
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 29 2.6
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 29 2.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 380 bits (935), Expect = e-106
Identities = 184/244 (75%), Positives = 198/244 (81%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + + ++ +GK L+EALD+I+ P RP
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
Query: 729 TDKP 740
TD+P
Sbjct: 242 TDRP 245
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 380 bits (935), Expect = e-106
Identities = 184/244 (75%), Positives = 198/244 (81%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + + ++ +GK L+EALD+I+ P RP
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
Query: 729 TDKP 740
TD+P
Sbjct: 242 TDRP 245
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 316 bits (775), Expect = 1e-86
Identities = 163/222 (73%), Positives = 174/222 (78%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++ + +
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHL 173
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKL 674
+P D TETTC C GSRDG + RK L
Sbjct: 174 SQSP---------DSTETTCLRSPRTCHGSRDGLLNARKETL 206
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 244 bits (597), Expect(2) = 1e-83
Identities = 112/116 (96%), Positives = 115/116 (99%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 356
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 84.2 bits (199), Expect(2) = 1e-83
Identities = 43/98 (43%), Positives = 55/98 (56%)
Frame = +3
Query: 447 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSLQPK 626
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP P +
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 627 CLGSRDGRWSVRKAKLTGKCLIEALDAILAPARPTDKP 740
+ ++ +GK L+EALD+I+ P RPTD+P
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRP 211
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2
Query: 557 PTAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKESKADGK 682
P AV FVPISG++GDNMLE S+ MPWFKGW VERKE A GK
Sbjct: 151 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGK 192
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 216 bits (527), Expect = 2e-56
Identities = 114/243 (46%), Positives = 159/243 (65%), Gaps = 1/243 (0%)
Frame = +3
Query: 15 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 194
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 195 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 374
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 375 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 551
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 552 YNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARPT 731
++ F+ + T +L + + W G CL+E +D+ +AP P+
Sbjct: 345 FS-----KPKFVPVSGFTGENL----IKRMELDW------YDGPCLLELIDSFVAPQPPS 389
Query: 732 DKP 740
D P
Sbjct: 390 DGP 392
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 216 bits (527), Expect = 2e-56
Identities = 114/243 (46%), Positives = 159/243 (65%), Gaps = 1/243 (0%)
Frame = +3
Query: 15 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 194
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 195 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 374
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 375 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 551
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 552 YNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARPT 731
++ F+ + T +L + + W G CL+E +D+ +AP P+
Sbjct: 363 FS-----KPKFVPVSGFTGENL----IKRMELDW------YDGPCLLELIDSFVAPQPPS 407
Query: 732 DKP 740
D P
Sbjct: 408 DGP 410
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 212 bits (517), Expect = 3e-55
Identities = 101/235 (42%), Positives = 155/235 (65%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAIL 713
G+NP ++ ++ + T ++ + GS +G W +G C IE +D +L
Sbjct: 284 GFNPKTDIT--YVPCSGLTGAFIKDRPTGS-EGNW------YSGPCFIEFIDVLL 329
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (330), Expect = 1e-32
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAER 206
KLK +
Sbjct: 62 KLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 96.3 bits (229), Expect = 2e-20
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 372 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 545
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 546 IGYNPLLSLSCPFLDGT 596
GY +CP + G+
Sbjct: 200 FGYP---GDTCPVIFGS 213
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 96.3 bits (229), Expect = 2e-20
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 372 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 545
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 546 IGYNPLLSLSCPFLDGT 596
GY +CP + G+
Sbjct: 201 FGYP---GDTCPVIFGS 214
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 96.3 bits (229), Expect = 2e-20
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 372 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 545
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 546 IGYNPLLSLSCPFLDGT 596
GY +CP + G+
Sbjct: 201 FGYP---GDTCPVIFGS 214
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 93.5 bits (222), Expect = 1e-19
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 551
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 552 YN 557
+N
Sbjct: 195 FN 196
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 93.5 bits (222), Expect = 1e-19
Identities = 65/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 551
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 552 YN 557
+N
Sbjct: 195 FN 196
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 390 KNGQTREHALLAFTLGVKQLIVGVNKMD 473
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 390 KNGQTREHALLAFTLGVKQLIVGVNKMD 473
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 9e-06
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 153 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 329
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 330 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 473
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 9e-06
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 33 IVVIGHVDSGKST 71
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.4 bits (100), Expect = 9e-05
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Frame = +3
Query: 27 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 206
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 207 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 383
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 384 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--- 554
I QT EH LLA ++I+ +NK D E + + E K+V +K +G
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 555 NPLLSLS 575
+P++ +S
Sbjct: 163 SPIVEMS 169
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 182
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 183 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 351 VAAGTG 368
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 182
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 183 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 351 VAAGTG 368
V +G
Sbjct: 141 VDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 12 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 353
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 12 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 353
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/116 (22%), Positives = 48/116 (41%)
Frame = +3
Query: 261 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 440
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 441 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTC 608
L++ NK+D + + +E+I V + + P++ +S + C
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQIAGFVQGTVAENA--PVIPISAQLKYNVDLVC 235
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.5 bits (83), Expect = 0.010
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Frame = +3
Query: 27 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 200
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 201 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 362
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 363 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 542
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 543 KIG 551
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.092
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.092
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 466 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 338
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 270 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 449
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 450 IVGVNKMDSTEPPYSEPR 503
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 628 HFG*RLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 464
HF R QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 18 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 72
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 628 HFG*RLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 464
HF R QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 628 HFG*RLQHVVSVPSRNGHESDSSGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 464
HF R QHV S PSR+ D +G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 453 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSLQPKCL 632
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 633 GS 638
GS
Sbjct: 112 GS 113
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 453 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSLQPKCL 632
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 633 GS 638
GS
Sbjct: 112 GS 113
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 453 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLDGTETTCWSLQPKCL 632
V + KM+ + E ++ +I KEVS ++ + + ++ FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 633 GS 638
GS
Sbjct: 112 GS 113
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 27 INIVVIGHVDSGKSTTT 77
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 449 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 291
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 290 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 171
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 264 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 359
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,722,735
Number of Sequences: 27780
Number of extensions: 395516
Number of successful extensions: 1230
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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