Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0331
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 413 e-118
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 398 e-113
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 297 7e-83
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 264 6e-73
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 7e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 413 bits (1018), Expect = e-118
Identities = 203/243 (83%), Positives = 208/243 (85%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG
Sbjct: 62 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKI
Sbjct: 122 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKI 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + K + ++ K+ GKCLIEALDAIL P RP
Sbjct: 182 GYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRP 241
Query: 729 TDK 737
TDK
Sbjct: 242 TDK 244
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 398 bits (981), Expect = e-113
Identities = 197/243 (81%), Positives = 203/243 (83%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG G
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKI
Sbjct: 122 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKI 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYN P PK + + + GK LIEALDAIL P+RP
Sbjct: 182 GYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRP 241
Query: 729 TDK 737
TDK
Sbjct: 242 TDK 244
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 297 bits (729), Expect = 7e-83
Identities = 148/187 (79%), Positives = 153/187 (81%)
Frame = +3
Query: 177 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 356
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 357 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 536
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 537 IKKIGYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILA 716
IKKIGYNP P + K + ++ K+ GKCLIEALDAIL
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILP 180
Query: 717 PARPTDK 737
P RPTDK
Sbjct: 181 PTRPTDK 187
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 264 bits (647), Expect = 6e-73
Identities = 132/171 (77%), Positives = 137/171 (80%)
Frame = +3
Query: 225 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 404
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 405 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPF 584
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNP P
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 585 LDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARPTDK 737
+ K + ++ K+ GKCLIEALDAIL P RPTDK
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 7e-04
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +3
Query: 264 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 443
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 444 QLIVGVNKMDSTEPPYSEPRFEEIK 518
+IV +NK+D + ++E K
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAK 271
Score = 25.4 bits (53), Expect = 0.56
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKST 71
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 27 INIVVIGHVDSGKST 71
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 350
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/28 (25%), Positives = 14/28 (50%)
Frame = -2
Query: 617 KAPTCCLRAIQKWARKRQQWVVANLLDV 534
+ P + I+ W W++ N+LD+
Sbjct: 490 RQPEPLIELIEHWMPLLPNWILENILDM 517
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 469 WIPLNHHTVSPDLRKSRRKY 528
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,639
Number of Sequences: 438
Number of extensions: 4964
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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