Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0331
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 335 2e-92
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 335 2e-92
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 335 2e-92
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 335 2e-92
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 195 3e-50
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 186 2e-47
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 101 5e-22
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 97 1e-20
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 2e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 2e-08
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 52 3e-07
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 4e-07
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 5e-07
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 47 1e-05
At5g13650.2 68418.m01585 elongation factor family protein contai... 42 3e-04
At5g13650.1 68418.m01584 elongation factor family protein contai... 42 3e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 42 6e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 42 6e-04
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 41 7e-04
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 40 0.001
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.003
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.016
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.016
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.086
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.26
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.4
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.7
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.5
At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR... 27 9.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 335 bits (823), Expect = 2e-92
Identities = 172/244 (70%), Positives = 188/244 (77%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLD
Sbjct: 2 GKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 62 KLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+
Sbjct: 122 GFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKV 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + G E G S G L+EALD I P RP
Sbjct: 182 GYNPDKIPFVP-ISGFE-----------GDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
Query: 729 TDKP 740
+DKP
Sbjct: 230 SDKP 233
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 557 PTAVAFVPISGWHGDNMLEPSTKMPWFKG 643
P + FVPISG+ GDNM+E ST + W+KG
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 335 bits (823), Expect = 2e-92
Identities = 172/244 (70%), Positives = 188/244 (77%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLD
Sbjct: 2 GKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 62 KLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+
Sbjct: 122 GFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKV 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + G E G S G L+EALD I P RP
Sbjct: 182 GYNPDKIPFVP-ISGFE-----------GDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
Query: 729 TDKP 740
+DKP
Sbjct: 230 SDKP 233
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 557 PTAVAFVPISGWHGDNMLEPSTKMPWFKG 643
P + FVPISG+ GDNM+E ST + W+KG
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 335 bits (823), Expect = 2e-92
Identities = 172/244 (70%), Positives = 188/244 (77%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLD
Sbjct: 2 GKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 62 KLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+
Sbjct: 122 GFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKV 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + G E G S G L+EALD I P RP
Sbjct: 182 GYNPDKIPFVP-ISGFE-----------GDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
Query: 729 TDKP 740
+DKP
Sbjct: 230 SDKP 233
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 557 PTAVAFVPISGWHGDNMLEPSTKMPWFKG 643
P + FVPISG+ GDNM+E ST + W+KG
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 335 bits (823), Expect = 2e-92
Identities = 172/244 (70%), Positives = 188/244 (77%)
Frame = +3
Query: 9 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 188
GKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLD
Sbjct: 2 GKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLD 61
Query: 189 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
KLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 62 KLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
Query: 369 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 548
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+
Sbjct: 122 GFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKV 181
Query: 549 GYNPLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDAILAPARP 728
GYNP P + G E G S G L+EALD I P RP
Sbjct: 182 GYNPDKIPFVP-ISGFE-----------GDNMIERSTNLDWYKGPTLLEALDQINEPKRP 229
Query: 729 TDKP 740
+DKP
Sbjct: 230 SDKP 233
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 557 PTAVAFVPISGWHGDNMLEPSTKMPWFKG 643
P + FVPISG+ GDNM+E ST + W+KG
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 195 bits (475), Expect = 3e-50
Identities = 103/251 (41%), Positives = 153/251 (60%), Gaps = 5/251 (1%)
Frame = +3
Query: 3 KKGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 182
K+ + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW
Sbjct: 232 KESDALSQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWA 291
Query: 183 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 362
LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A
Sbjct: 292 LDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDAS 351
Query: 363 TGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 539
G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S++
Sbjct: 352 VGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFL 409
Query: 540 KKIGYNPLLSLSCPFLDGTET----TCWSLQPKCLGSRDGRWSVRKAKLTGKCLIEALDA 707
+ SC F D + T + Q D R S + G CL++A+D+
Sbjct: 410 Q----------SCRFKDSSLTWIPLSAMENQNLVAAPSDNRLS---SWYQGPCLLDAVDS 456
Query: 708 ILAPARPTDKP 740
+ +P R KP
Sbjct: 457 VKSPDRDVSKP 467
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 186 bits (452), Expect = 2e-47
Identities = 84/184 (45%), Positives = 127/184 (69%)
Frame = +3
Query: 6 KGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 185
+ +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++
Sbjct: 95 EANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIM 154
Query: 186 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 365
D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A
Sbjct: 155 DTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARK 214
Query: 366 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 545
GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K
Sbjct: 215 GEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKA 274
Query: 546 IGYN 557
GYN
Sbjct: 275 SGYN 278
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 101 bits (242), Expect = 5e-22
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
++K H+NI IGHVD GK+T T L I +K+++ +D
Sbjct: 75 RKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDA 119
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 120 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 179
Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 536
QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 180 MP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 97.1 bits (231), Expect = 1e-20
Identities = 62/177 (35%), Positives = 90/177 (50%)
Frame = +3
Query: 12 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 191
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 192 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 371
E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 372 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 542
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 390 KNGQTREH 413
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 390 KNGQTREH 413
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 52.4 bits (120), Expect = 3e-07
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 210 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 377
RGITI + + +E + + + +ID PGH DF + + + A+L+V A G E
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 190
Query: 378 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 539
A QT + LA + ++I +NK+D P +EP E++ +E+ I
Sbjct: 191 A------QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/117 (30%), Positives = 56/117 (47%)
Frame = +3
Query: 18 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 197
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 198 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
E+ERGITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 47.2 bits (107), Expect = 1e-05
Identities = 54/177 (30%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N +I H+D GKST L+ G I K G G +Y LDKL +RE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRE 109
Query: 210 RGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 362
RGIT+ E S Y + +ID PGH DF + S A+L+V A
Sbjct: 110 RGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAA 169
Query: 363 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
G QT + LAF + ++ +NK+D P ++P E +K ++ S
Sbjct: 170 QG-------VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP--ERVKAQLKS 213
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 42.3 bits (95), Expect = 3e-04
Identities = 46/159 (28%), Positives = 66/159 (41%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185
Query: 390 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 506
QTR A G ++V VNK+D P + P F
Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 42.3 bits (95), Expect = 3e-04
Identities = 46/159 (28%), Positives = 66/159 (41%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 210 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 389
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184
Query: 390 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 506
QTR A G ++V VNK+D P + P F
Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +3
Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 428
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 429 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +3
Query: 249 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 428
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 429 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
+ +K +I+ NK+D + + E I+K +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +3
Query: 243 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 410
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 411 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLLSLSCPFLD 590
H + +K +I+ NK+D + + + E I+K + + + P++ +S
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNTVADAA--PIVPVSAQLKY 223
Query: 591 GTETTC 608
+ C
Sbjct: 224 NIDVVC 229
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +3
Query: 261 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 440
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 441 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
K +I+ NK+D + + + E+I++ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 197
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 198 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 353
E ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 210 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 30 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 209
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 210 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 368
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 34.3 bits (75), Expect = 0.086
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = +3
Query: 264 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 443
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 444 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
++V +NK D P + P E++K +++S
Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTS 346
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 273 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 449
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 450 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 557
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 270 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 449
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 450 IVGVNKMD 473
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 264 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 443
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 444 QLIVGVNKMD 473
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 270 IIDAPGHRDFIKNMITGTSQADCAVLIV 353
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 270 IIDAPGHRDFIKNMITGTSQADCAVLIV 353
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Frame = +3
Query: 189 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 356
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 357 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 473
A G QT E A+ +++ +NK+D
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 492 SEPR---FEEIKKEVSSYIKKIGYNPLLSLSCP 581
SEP+ FEE K+V ++K+ GYN + + P
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 375 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 533
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 559 HCCRFRAHFWMARRQHVGAFNQNALVQG 642
HCC HF R +H+ F+ + QG
Sbjct: 907 HCCELPYHFLRVRSEHLFIFHGDLFPQG 934
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,988,666
Number of Sequences: 28952
Number of extensions: 376313
Number of successful extensions: 1197
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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