Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0327
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   150   9e-39
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   150   9e-39
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   135   3e-34
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  150 bits (363), Expect = 9e-39
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +2

Query: 284 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 463
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 464 FDNRMVNHFVQEFKRKYKKDLATNKRAL 547
           FDNR+V +  Q+FK+K+K D++ N RAL
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL 88


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  150 bits (363), Expect = 9e-39
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +2

Query: 284 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 463
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 464 FDNRMVNHFVQEFKRKYKKDLATNKRAL 547
           FDNR+V +  Q+FK+K+K D++ N RAL
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL 88


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  135 bits (326), Expect = 3e-34
 Identities = 59/88 (67%), Positives = 80/88 (90%)
 Frame = +2

Query: 284 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 463
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 464 FDNRMVNHFVQEFKRKYKKDLATNKRAL 547
           FD +++++F++  K+K+KKD+  +K+AL
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKAL 87


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 56  DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 181
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 239 TKDAGTISGLNVLRIINEPTAA 304
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +1

Query: 127 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 252
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/61 (18%), Positives = 24/61 (39%)
 Frame = -2

Query: 490 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 311
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 310 N 308
           +
Sbjct: 270 S 270


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 429 PPPATPTWEVRTL 467
           PP   PTW VR L
Sbjct: 13  PPQEMPTWFVRWL 25


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 447  TWEVRTLTIAWSTTLSRSSRGNTKRTSLPT 536
            TW   T T  W TT +      T+ T+  T
Sbjct: 1041 TWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 201 VITAFCTVLPR*ASAVSFIF 142
           +ITAF +VLP+ A  +++ F
Sbjct: 87  LITAFLSVLPQLAWDITYRF 106


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory
          receptor candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 81 TLILGLPPSLTTSKGQC 31
          +L+LGL PS   + G+C
Sbjct: 17 SLLLGLYPSYLQTVGKC 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,162
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)