Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0327
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   137   3e-34
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   2.3  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   2.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   7.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   7.0  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   7.0  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   7.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   7.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   7.0  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   7.0  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   7.0  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   7.0  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   7.0  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  137 bits (331), Expect = 3e-34
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +2

Query: 188 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 367
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 368 GGGTFDVSILTIEDG 412
           GGGTFDVSILTI++G
Sbjct: 61  GGGTFDVSILTIDEG 75


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+ +P++         PPP +  +T
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 253


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+ +P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTT 254


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTT 254


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+ +P +         PPP +  +T
Sbjct: 222 WIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTT 254


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 487  LCPGVQEEIQKGPRYQQESS*RL 555
            L PG+QE I +  R QQE+  R+
Sbjct: 2077 LSPGLQEVIDRFVRIQQENGHRI 2099


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
 Frame = -3

Query: 444 VSPAVDFTSKIPSSMVRMDTSKVPPP---RSKI---------STFRS-PVPF-LSRP*AI 307
           +SP  +F++    S++ ++ +  PPP   RSK           T RS PVPF L+ P A 
Sbjct: 439 ISPPAEFSNGSSKSLLLLNGNGPPPPVPERSKTPNSIYLSQNGTPRSTPVPFALAPPPAA 498

Query: 306 AAAVGSLMIR 277
           + A G   +R
Sbjct: 499 SPAFGDRSVR 508


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 178 NCAECSYHGSRVLQ*LSKTSHKR-CRY 255
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 178 NCAECSYHGSRVLQ*LSKTSHKR-CRY 255
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 178 NCAECSYHGSRVLQ*LSKTSHKR-CRY 255
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 178 NCAECSYHGSRVLQ*LSKTSHKR-CRY 255
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTT 254


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTT 254


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+  P++         PPP +  +T
Sbjct: 221 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTT 253


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 423 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 298
           T+K+ + M    T+  PPP  ++    +P P  + +P + AAA
Sbjct: 572 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 614


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 447 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIST 349
           W+ P    T+  P++         PPP +  +T
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTT 254


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 423 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 298
           T+K+ + M    T+  PPP  ++    +P P  + +P + AAA
Sbjct: 571 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 613


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,037
Number of Sequences: 2352
Number of extensions: 12689
Number of successful extensions: 41
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)