Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0326
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 46 3e-05
At3g28840.1 68416.m03598 expressed protein 37 0.016
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 35 0.050
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 33 0.15
At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3, ubiqu... 33 0.26
At1g12080.1 68414.m01396 expressed protein 33 0.26
At4g28180.1 68417.m04040 expressed protein 32 0.46
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 32 0.46
At4g21670.1 68417.m03139 double-stranded RNA-binding domain (DsR... 31 0.61
At1g12080.2 68414.m01397 expressed protein 31 0.61
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 31 0.81
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 31 1.1
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 1.1
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 30 1.4
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 30 1.9
At3g57120.1 68416.m06359 protein kinase family protein contains ... 30 1.9
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 3.3
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 29 3.3
At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family... 29 4.3
At3g28830.1 68416.m03597 expressed protein 29 4.3
At3g24870.1 68416.m03119 expressed protein 29 4.3
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 29 4.3
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 29 4.3
At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] syntha... 29 4.3
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 28 5.7
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 28 5.7
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 28 5.7
At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zi... 28 5.7
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 5.7
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 28 5.7
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 28 5.7
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 28 7.5
At1g08170.1 68414.m00902 histone H2B family protein similar to h... 28 7.5
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 27 9.9
At2g46310.1 68415.m05760 AP2 domain-containing transcription fac... 27 9.9
At2g11005.1 68415.m01177 glycine-rich protein 27 9.9
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 46.0 bits (104), Expect = 3e-05
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 4/215 (1%)
Frame = -2
Query: 633 TGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIP 454
+G +G SA G +SAG A+ + T G S +S G S G + S P
Sbjct: 304 SGEAASGGSAETGGESASAGAASGGSAETGGESGSGGAASG--GESASGGATSGGS---P 358
Query: 453 NTVSLATIGEDSLAGIEAVSITSAA--LISLGT--SGATSSKATGADSATSKXXXXXXXX 286
T A G +S +G A SA+ S G+ SG S+ AT SA +
Sbjct: 359 ETGGSAETGGESASGGAASGGESASGGAASSGSVESGGESTGATSGGSAETSDESASGGA 418
Query: 285 XXXXXXXXXXGFCTVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDS 106
S G S G++ T +E+ AS A+G + + + GA
Sbjct: 419 ASGGESASGGAASGGSAETGGESTSSGVASGGSTGSES-ASAGAASGGSTEANGGAAAGG 477
Query: 105 EVTGAGSGTATESLSITAGRTSGAFVVAEICDGVS 1
T AGSGT+TE+ S+ G ++ A V+E G S
Sbjct: 478 S-TEAGSGTSTETSSM-GGGSAAAGGVSESSSGGS 510
Score = 43.2 bits (97), Expect = 2e-04
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 6/204 (2%)
Frame = -2
Query: 630 GITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIPN 451
G G SA+ G +S+G +T TS G +S + +G + + AS +
Sbjct: 374 GAASGGESASGG--AASSGSVESGGESTGATSGGSAETSDESASGGAASGGESASGGAAS 431
Query: 450 TVSLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSKXXXXXXXXXXXXX 271
S T GE + +G+ + T + S G + S++A G +A
Sbjct: 432 GGSAETGGESTSSGVASGGSTGSESASAGAASGGSTEANGGAAAGGSTEAGSGTSTETSS 491
Query: 270 XXXXXGFCTVSVSVGVLSED--GGLSVTVGTAAEAIASDSIATGQTAKTST----GATRD 109
S + G +SE GG + GT+ A + A G + T T G+
Sbjct: 492 MGGG------SAAAGGVSESSSGGSTAAGGTSESASGGSATAGGASGGTYTDSTGGSPTG 545
Query: 108 SEVTGAGSGTATESLSITAGRTSG 37
S G SG+A+ES S+ G G
Sbjct: 546 SPSAGGPSGSASES-SMEGGTFGG 568
Score = 41.9 bits (94), Expect = 4e-04
Identities = 54/204 (26%), Positives = 77/204 (37%), Gaps = 8/204 (3%)
Frame = -2
Query: 624 TEAGSSA-TRGILGSSAGFANV-SD---STTVGTSVGCTCSSSATGTGISRGTSDKASLV 460
T+ GS T G GSSAG + SD +T G G T SA G G S A
Sbjct: 158 TDGGSYGDTTGDSGSSAGSPSYPSDDGSGSTAGGPSGSTTDGSAGGESSMGGDSSSAG-A 216
Query: 459 IPNTVSLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSKXXXXXXXXXX 280
+ S AT AG + S + GA S+ + GA + +
Sbjct: 217 AGESGSAATADSGDAAGAD-----SGGAAGADSGGAASADSGGAAAGETASGGAAAADTS 271
Query: 279 XXXXXXXXGFCTVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEV 100
+ + G + G + T G + EA + S TG + ++ A+ S
Sbjct: 272 GGSAETGGESASGGAASGAGAASGASAKTGGESGEAASGGSAETGGESASAGAASGGSAE 331
Query: 99 TGAGSGT---ATESLSITAGRTSG 37
TG SG+ A+ S + G TSG
Sbjct: 332 TGGESGSGGAASGGESASGGATSG 355
>At3g28840.1 68416.m03598 expressed protein
Length = 391
Score = 36.7 bits (81), Expect = 0.016
Identities = 42/196 (21%), Positives = 65/196 (33%)
Frame = -2
Query: 609 SATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIPNTVSLATI 430
SA + G A A+ S S+G T + + +++ TI
Sbjct: 103 SAMSAMSGKGAASADSSKVMDTLLSMGKTLGTQQQSGSSVMSLGQRKEMIMSMAKWAQTI 162
Query: 429 GEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSKXXXXXXXXXXXXXXXXXXGF 250
G+ + A S + SLG G +S A DS S
Sbjct: 163 GQ-FVVSAAAKSGNKIDISSLGIDGIDASAAGAGDSTASGGVSATGTGSYGAGAGGSSAS 221
Query: 249 CTVSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATE 70
+ + + G + G + TAA + T T+ GAT T AG TA++
Sbjct: 222 GSDTAAGGTTATGGTTAAGGSTAAGGTTASGAGTAGYGATAGGATASGAGTAAGGTTASD 281
Query: 69 SLSITAGRTSGAFVVA 22
+ + SGA A
Sbjct: 282 AGTAAGTTASGAGTAA 297
Score = 34.3 bits (75), Expect = 0.087
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -2
Query: 636 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVI 457
G G T G++A+ G++AG SD+ GT+ G T S + T G + A+
Sbjct: 257 GYGATAGGATASGA--GTAAGGTTASDA---GTAAGTTASGAGTAAGGTTAAGAGAAAGA 311
Query: 456 PNTVSL-ATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADS 322
A G + AG + S S+ + T+G TSS T A S
Sbjct: 312 GAAAGAGAAAGGTTAAGGVSGSYGSSGGSASNTNGGTSSCGTSACS 357
Score = 31.1 bits (67), Expect = 0.81
Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 6/147 (4%)
Frame = -2
Query: 444 SLATIGEDSLAGIEAVSITSAALISLGT----SGATSSKATGADSATSKXXXXXXXXXXX 277
SL G D+ A S S + + GT +GA S A+G+D+A
Sbjct: 181 SLGIDGIDASAAGAGDSTASGGVSATGTGSYGAGAGGSSASGSDTAAGGTTATGGTTAAG 240
Query: 276 XXXXXXXGFCTVSVSVGVLSEDGGLSVT-VGTAAEAIASDSIATGQTAKTSTGATRDSEV 100
+ + + G + GG + + GTAA + T S T
Sbjct: 241 GSTAAGGTTASGAGTAGYGATAGGATASGAGTAAGGTTASDAGTAAGTTASGAGTAAGGT 300
Query: 99 TGAGSGTAT-ESLSITAGRTSGAFVVA 22
T AG+G A + AG +G A
Sbjct: 301 TAAGAGAAAGAGAAAGAGAAAGGTTAA 327
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 636 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGIS 490
G G G++A G+ GS + +T GTS C S+ + G G S
Sbjct: 316 GAGAAAGGTTAAGGVSGSYGSSGGSASNTNGGTS-SCGTSACSNGGGAS 363
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM
TIGR01612: reticulocyte binding protein; contains
TIGRFAM TIGR00864: polycystin cation channel protein;
similar to fimbriae-associated protein Fap1
[Streptococcus parasanguinis] (GI:3929312)
Length = 1498
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 308 PLDVAESAPVALDEVAPEVPSEI-KAADVIETA---SIPASESSPIVASETVLGITSEAL 475
P+ V E PV+++ P V SE+ +++DV T+ + AS+ + S TV + SE
Sbjct: 293 PVTVLE--PVSVENGHPPVESELERSSDVPFTSVAEKVNASDGEVLPDSGTVDVVVSEVS 350
Query: 476 SDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEE 586
SDVP E A QP+ +VVE+ +E+
Sbjct: 351 SDVPAETQALNAISLDSQPSGKDSVVENGNSKSESED 387
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 33.5 bits (73), Expect = 0.15
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 4/201 (1%)
Frame = -2
Query: 624 TEAGSSATRGILGSSAGFA---NVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIP 454
T S+A+ +S GF+ + + STT T+ ++++ + S GTS + +
Sbjct: 318 TSNTSNASASPFSASTGFSFLKSTASSTTSSTTPSAPPQTASSSSSFSFGTSANSGFNLS 377
Query: 453 NTVSLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSKXXXXXXXXXXXX 274
S A S TS A+ S+ T+ TSS A SA +
Sbjct: 378 TGSSAA-----------PASSTSGAVFSIATTTTTSSSTPAATSAPASSAPASTMAFPSF 426
Query: 273 XXXXXXGFCTVSVSVGVLSEDG-GLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVT 97
T + S S G GL+ + + A +T+ T +++ +
Sbjct: 427 GVTSSATNTTPASSAATFSTTGFGLASSTPATGSTNSFTGFAVPKTS-TPASSSQPQTTS 485
Query: 96 GAGSGTATESLSITAGRTSGA 34
A S + S S TA TS A
Sbjct: 486 PAFSFSLPSSTSTTAPATSSA 506
>At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3,
ubiquitin ligase; contains similarity to Apc1/Tsg24
protein, the largest subunit of human anaphase-promoting
complex (APC/C) GI:11967711 from [Homo sapiens]
Length = 1678
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +2
Query: 377 KAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVE 556
+A +V + +P S SPI+ S +L E + P PVA + + ++P +
Sbjct: 143 QAGEVNPPSHVPFSPVSPILGSREMLRQRKEVGNSSPQNFHSPVAH-DLISKRDMPCMSS 201
Query: 557 SETLAKPAEEPSIPLVAEE 613
L P EEP P EE
Sbjct: 202 HLILRDPLEEPG-PTYVEE 219
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/105 (25%), Positives = 46/105 (43%)
Frame = +2
Query: 311 LDVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPL 490
++V + PVA++ V EVP++ V+ET + +E +++ P+
Sbjct: 4 VEVEQVTPVAVENV--EVPTKTVEETVVETEKKDEETEKKTEEKDE----KTEVITETPV 57
Query: 491 EIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEPASV 625
V E + + TE P VVE E + EE + A E +V
Sbjct: 58 ---VEEEEKKAEEVTETPAVVEEEKKTEVVEEKQTEVAAAEEVAV 99
>At4g28180.1 68417.m04040 expressed protein
Length = 256
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 380 AADVIETASIPASESSPIVASETVLGITSEALS---DVPLEIPVPVAELEQVQPTEVPTV 550
+A + + A++ P + E+V + +++S +P+ +PVPV +L PTV
Sbjct: 6 SAGKVTAPPVAAAQIPPPLEEESVKEVVVQSVSVSVPIPISVPVPVPDL----VPSAPTV 61
Query: 551 VESETLAKPAEEPSIPLVAEEPASVIPVPV 640
+SE P P ++ + + V V
Sbjct: 62 SDSEAQVPLPLSPPAPEISHSKSDICSVSV 91
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 31.9 bits (69), Expect = 0.46
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = -2
Query: 618 AGSSATRGILGSSAGFANVSDSTTVGTS--VGCTCSSSATGTGISRGTSDKASLVIPNTV 445
+GSS T + GSS+ F + S G+S G SSS G+ +G + P+T+
Sbjct: 482 SGSSTTTSVFGSSSAFGTTTPSPLFGSSSTPGFGSSSSIFGSAPGQGATPAFGNSQPSTL 541
Query: 444 SLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSK 310
+T A T +A G G +S+ A G +S +K
Sbjct: 542 FNSTPSTGQTG--SAFGQTGSA---FGQFGQSSAPAFGQNSIFNK 581
>At4g21670.1 68417.m03139 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 981
Score = 31.5 bits (68), Expect = 0.61
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +2
Query: 332 PVALDEVAP-EVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPV 508
P++ D +A EV +K A +A +PA+ P +A+ + S + VP +PV V
Sbjct: 472 PLSFDGMADTEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVP--VPVQV 529
Query: 509 AELEQVQPTEVPTVVESETLAKPAEEPSIP--LVAEEPA 619
+ + +QP+ + S +P + SI LV EP+
Sbjct: 530 VQ-QAIQPSAM--AFPSIPFQQPQQPTSIAKHLVPSEPS 565
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +2
Query: 344 DEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITS-EALSDVPLEIPVPVAELE 520
+E P V + A ++ET E + ET + ++V E PV E +
Sbjct: 38 EESVPAVTEQKSEAPIVETNEEVVVEEAEKKDEETEKKTEEKDEKTEVITETPVVEEEEK 97
Query: 521 QVQP-TEVPTVVESETLAKPAEEPSIPLVAEEPASV 625
+ + TE P VVE E + EE + A E +V
Sbjct: 98 KAEEVTETPAVVEEEKKTEVVEEKQTEVAAAEEVAV 133
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/87 (27%), Positives = 33/87 (37%)
Frame = +2
Query: 470 ALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEPASVIPVPVXXX 649
A +V PV V +E T TVVE+E +P E S+P V E+ + V
Sbjct: 2 ATVEVEQVTPVAVENVEVPTKTVEETVVETEVTQQPEE--SVPAVTEQKSEAPIVETNEE 59
Query: 650 XXXXXXXXXXXSPKRLVESAKEKIETI 730
++ E EK E I
Sbjct: 60 VVVEEAEKKDEETEKKTEEKDEKTEVI 86
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 31.1 bits (67), Expect = 0.81
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 290 DAGETVPLDVAE----SAPVALDEVAP--EVPSEIKAADVIETASIPASESSPIVASETV 451
D T+P VAE +APV+ ++ P EV E +A S+ E +V +E V
Sbjct: 25 DKEVTIPTPVAEKEEVAAPVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEETVVVAEKV 84
Query: 452 LGITSEALSDVPLE 493
+ +T+E + LE
Sbjct: 85 VVLTAEEVQKKALE 98
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +2
Query: 320 AESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIP 499
AE PV V PE + + +A+V E+ +PA +S V S + E + E
Sbjct: 362 AEKPPVETP-VEPEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDD 420
Query: 500 VPVAELEQVQPTEVPTVVESETLAKPAEE 586
P E EQ + + E+E + P E
Sbjct: 421 SPEKE-EQTE--TLAAAAEAEEVVPPIPE 446
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 395 ETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAK 574
E A P E+ V E +TS + + + +P V E+V +E P VVE E +A
Sbjct: 360 EEAEKPPVETP--VEPEAEASVTSAEVEE-SVCVPAEVTS-EEVPSSETPKVVEEEVIAT 415
Query: 575 PAEEPS 592
AE+ S
Sbjct: 416 KAEDDS 421
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +2
Query: 410 PASESSPIVASETVLGITSEALSDV-----PLEIPVPV-AELEQVQPTEVPTVVESETLA 571
P +P +SET T + SD P++ P PV + +PT+VPT SE+
Sbjct: 653 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQ 712
Query: 572 KPAEEP-SIPLVAEEPAS 622
P P P + P +
Sbjct: 713 APNLSPVQAPTPVQAPTT 730
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 30.3 bits (65), Expect = 1.4
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +2
Query: 299 ETVPLDVAES-APVAL---DEVAPEVPSEIKAADV--IETASIPASESSPIVASETVLGI 460
E++P V ES APV + D V E I+ + +ET + + ET + +
Sbjct: 35 ESLPAPVTESQAPVEVTTKDLVVEETEKPIEETEEAQVETPEVVEIKKDEEAPVETPVVV 94
Query: 461 TSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLV 604
E+ ++ +E E+E+ + E P VVE E KP E P V
Sbjct: 95 EDESKTEEVVEAKKE-EEVEEKKTEEAPVVVEEE--KKPEAEEEKPAV 139
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = -2
Query: 630 GITEAGSSATRG--ILGSSAGFANVSD----STTVGTSVGCTCSSSATGTGISRGTSDKA 469
G T +G S RG I+ +++ +S+ S G +G CSS +G+G+ +
Sbjct: 382 GSTGSGGSLLRGLGIVSTTSSSMELSNHDALSLAPGLGLGLPCSSGGSGSGLKELMMGNS 441
Query: 468 SLVIPNTVSLATIGEDSLAGI--EAVSITSAALISLGTSGATSSKATG 331
S+ P +L +G G SA L S+G G +G
Sbjct: 442 SVFGPKQTTLDFLGLGRAVGNGGNTGGGLSALLTSIGGGGGIDLFGSG 489
>At3g57120.1 68416.m06359 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 456
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 159 SIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTS 40
S +T T T+T T +S TGA S ++ + S A RTS
Sbjct: 50 SPSTSNTGTTTTTTTSNSNKTGASSSSSGAASSSVASRTS 89
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +2
Query: 320 AESAPVALDEVA-PEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEI 496
A P+ + A PEV + + + +I A SS A +T + A ++ P
Sbjct: 1139 APKKPLLTQKTAQPEVAKPLALEEPTKPLAIEAPPSSE--APQTESAPETAAAAESPAPE 1196
Query: 497 PVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEP 616
VAE V SET A P + P V+E P
Sbjct: 1197 TAAVAESPAPGTAAVAEAPASETAAAPVDGPVTETVSEPP 1236
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 29.1 bits (62), Expect = 3.3
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +2
Query: 341 LDEVAPEVPSEIKAADVIETASI-PASESSPIVASETVLGITSEALSDVPLEIPVPVAEL 517
+ E A + EI ++D + + PAS+S+P+V E + T + E P V E+
Sbjct: 21 VSEEAKLMEKEIISSDSADVVNDKPASDSNPVVTKEEEIDQT--PAGEPEKESPAVVEEV 78
Query: 518 EQVQPTEVPT-VVESETLAKPAEEPSI--PLVAEEPASVIPV 634
V E T V+ E K AE+ + P++ +E + + V
Sbjct: 79 GAVVKAEESTETVKHENGEKGAEQVELKEPILVKETVAEVNV 120
>At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family
protein
Length = 466
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/97 (24%), Positives = 37/97 (38%)
Frame = +2
Query: 332 PVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVA 511
P + A P+ + A TA+ + P+ ETV T+ VP PVP
Sbjct: 356 PQSTSNKALPAPATVTAEAESATATTTTVDK-PVPEPETVAATTTTVDKPVPEPEPVP-- 412
Query: 512 ELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEPAS 622
E V + V ++ + +P E + P P S
Sbjct: 413 --EPVPVPAIEAAVAAQVITEPTETEAKPKPHSRPLS 447
>At3g28830.1 68416.m03597 expressed protein
Length = 539
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = -2
Query: 240 SVSVGVLSEDGGLSVTV--GTAAEAIASDSIAT-GQTAKTSTGATRDSEVTGAGSGTATE 70
S G +S G +S +++ + AS S+AT + + + AT+ E +G + T ++
Sbjct: 206 STKSGSVSSSGSVSTKSKESSSSGSSASGSVATKSKESSGGSAATKSKESSGGSAATKSK 265
Query: 69 SL---SITAGRTSGA 34
S T G+TSG+
Sbjct: 266 ESSGGSATTGKTSGS 280
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +2
Query: 314 DVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVAS--ETVLGITSEALSDVP 487
+ ++A + + P+ +++K + + ++PA E VAS T + + + +D
Sbjct: 1707 NTTQTASMGTTKGMPQASNDLKNIKAVGSTAVPALEPPSCVASVQSTASKVVNNSNTDSA 1766
Query: 488 LEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEP 616
PV Q + V + + + P+EE P + E+P
Sbjct: 1767 GNDPVSTPNQGLAQKHGIKGVTQRQQQSLPSEEKR-PKLPEKP 1808
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -2
Query: 228 GVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAG 49
G L G + T+ I + TG T + T TG G+GT T + + T G
Sbjct: 109 GFLGTSGNVLNTIDVHYSPIPTGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGG 168
Query: 48 RTSG 37
+G
Sbjct: 169 TGTG 172
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -2
Query: 207 GLSVTVGTAAEAIASDSIATGQTAK-TSTGATRDSEVTGAGSGTATESLSITAGRTSGA 34
G GT TG T T TG T TG G+GT T G +G+
Sbjct: 192 GTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGGTGTGTGTGTGS 250
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -2
Query: 228 GVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAG 49
G L G + T+ I + TG T + T TG G+GT T + + T G
Sbjct: 109 GFLGTSGNVLNTIDVHYSPIPTGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGG 168
Query: 48 RTSG 37
+G
Sbjct: 169 TGTG 172
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -2
Query: 207 GLSVTVGTAAEAIASDSIATGQTAK-TSTGATRDSEVTGAGSGTATESLSITAGRTSGA 34
G GT TG T T TG T TG G+GT T G +G+
Sbjct: 192 GTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGGTGTGTGTGTGS 250
>At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] synthase
II, putative similar to Swiss-Prot:P56902
3-oxoacyl-[acyl-carrier-protein] synthase II (EC
2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II)
[Rhizobium meliloti]
Length = 461
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -2
Query: 243 VSVSVGVLSEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESL 64
V V+ G S LSV + + A+++ ++ Q A RD V G GSG
Sbjct: 230 VMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLE- 288
Query: 63 SITAGRTSGAFVVAEIC 13
+ GA + AE+C
Sbjct: 289 EYEHAKRRGAKIYAELC 305
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 219 SEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSE-VTGAGSGTATESLSITAGR 46
S+DG + + G +A+ + S A G++ TS T+D V +G + + I +GR
Sbjct: 193 SKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 251
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 219 SEDGGLSVTVGTAAEAIASDSIATGQTAKTSTGATRDSE-VTGAGSGTATESLSITAGR 46
S+DG + + G +A+ + S A G++ TS T+D V +G + + I +GR
Sbjct: 285 SKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGR 343
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -2
Query: 612 SSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSAT----GTGISRGTSDKASLVIPNTV 445
SS G GS +GF +SD + T SS T +G+ G S K L+
Sbjct: 200 SSGGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVTAPPKSSGMKLGKSGKNQLM----E 255
Query: 444 SLATIGEDSLAGIEAVSITSAA 379
SL GED + ++ + AA
Sbjct: 256 SLKAEGEDVIEDVKPTGQSKAA 277
>At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 510 ATGTGISRGTSDKASLVIPNTVSLATIGEDSLAG 409
A TG+S+G++ +++L N ++LA E+ LAG
Sbjct: 60 AHATGVSKGSATRSALQKSNHLALAKFLENDLAG 93
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 5.7
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 EVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQV 526
E +P P +A S P ESSP T T+ S P P P E
Sbjct: 97 EPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPS 156
Query: 527 QPTEVP--TVVESETLAKPAEEPSIPLVAEEPASVIPVP 637
P P + L P+ P L PAS IP P
Sbjct: 157 LPAPDPPSNPLPPPKLVPPSHSPPRHL-PSPPASEIPPP 194
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +2
Query: 332 PVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVA 511
PV + EVAPEV ++ A+ ++T A E SP+ + +V+ SE+ + E+
Sbjct: 30 PVEVKEVAPEVTTQ---AEEVKTEQ--AKEESPVEEAVSVVEEKSESAPE-STEVASEAP 83
Query: 512 ELEQVQPTEVPTVVESETLAKPAEE 586
+ E P E +EE
Sbjct: 84 AAAEDNAEETPAAAEENNDENASEE 108
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 510 ATGTGISRGTSDKASLVIPNTVSLATIGEDSLAG 409
A TG+S+G++ +++L N ++LA E+ LAG
Sbjct: 59 AHATGVSKGSATRSALQKANHLALAMFLENELAG 92
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 630 GITEAGSSATRGILGSSAGFANVSDS--TTVGTSVGCTCSSSATGTGISRGTSDKASLVI 457
G E GS T+ I G S + T T+V T SSSA G+G R SD+ + +
Sbjct: 2 GQDEVGSDQTQIIKGKRTKRQRSSSTFVVTAATTVTST-SSSAGGSGGERAVSDEYNSAV 60
Query: 456 PNTVSL-ATIGEDSLA 412
+ V+ T E+ +A
Sbjct: 61 SSPVTTDCTQEEEDMA 76
>At1g08170.1 68414.m00902 histone H2B family protein similar to
histone H2B from Chlamydomonas reinhardtii [SP|P54347,
SP|P54346, SP|P50565], Volvox carteri [SP|P16867,
SP|P16868]; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 243
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +2
Query: 299 ETVPLDVAESA-PVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEAL 475
ET+ + V E P + E A + ++ + ++ E V E L +
Sbjct: 20 ETIKVTVTEEGDPCVITETANDQETQDLTFSIPVGENVTTVEIPVEVPDERSLPVGENVT 79
Query: 476 SDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPS 592
+ ++IPV + QP E P V E +P E P+
Sbjct: 80 T---VKIPVDDRDESSPQPPETPVEVRDEPSPQPPETPA 115
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 299 ETVPLDVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVL-GITSEAL 475
E + LD S V ++ E P + + + + +S S + L GI + A
Sbjct: 242 EPILLDAESSNLVGVENTNSEDPESLLNTEPTNVSDLENHVNSQKEDSLSSLSGIDAYAA 301
Query: 476 SDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPS 592
S E+P ++L+ ++ + ++ET AEE S
Sbjct: 302 SGTVTELPEVSSQLDSTSKPQIVPLNDTETAFATAEELS 340
>At2g46310.1 68415.m05760 AP2 domain-containing transcription
factor, putative
Length = 294
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = +2
Query: 320 AESAPVALDEVAPEVPSEIKAADVIETASIPASE---SSPIVASETVLGITSEALSDVPL 490
AE A + D A + + + P +E +P++ ETV G S S + L
Sbjct: 131 AEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSARESQISL 190
Query: 491 EIPVPVAELEQVQPTEVPT 547
P V TE T
Sbjct: 191 CSPTSVLRFSHNDETEYRT 209
>At2g11005.1 68415.m01177 glycine-rich protein
Length = 170
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/90 (22%), Positives = 41/90 (45%)
Frame = -2
Query: 636 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVI 457
G+ ++ ++ G G S GF + SD+ +V + S G+G G +D + +
Sbjct: 41 GSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGGSRDGGGSG-DNGNTDDGVVAL 99
Query: 456 PNTVSLATIGEDSLAGIEAVSITSAALISL 367
+ L T G A + +++ AA++ +
Sbjct: 100 VMSFVLVT-GVAPTATVVLMTVAVAAVVGV 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,171,993
Number of Sequences: 28952
Number of extensions: 221702
Number of successful extensions: 1084
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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