Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0325
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 86 2e-17
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 68 5e-12
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 60 2e-09
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 57 1e-08
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 46 2e-05
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 42 3e-04
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 42 3e-04
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 38 0.005
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 38 0.008
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 36 0.032
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 34 0.074
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 34 0.097
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 33 0.13
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 33 0.13
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 30 1.6
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34) 29 3.7
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 29 3.7
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 4.8
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 28 6.4
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 86.2 bits (204), Expect = 2e-17
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
KCP+C K+VY AEER+A G KWHK C C C K LDSTN ++ +GE+YCK C+ + F
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNF 66
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +2
Query: 89 ADN-PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 265
ADN PKCP+CG +VY AEE K+HK CF C C+K LDSTN + H+G+ + +
Sbjct: 38 ADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGKCHTTIVTQ 97
Query: 266 RK 271
R+
Sbjct: 98 RR 99
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE 235
CP+C K YAAE+ + G WHK CF C C K LDST + H+
Sbjct: 218 CPRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDSTTVAVHK 261
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCG--LCQKLLDSTNCSEHEG 238
+C +C K Y AE G +WHK CF C C+K L+STNC E G
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNG 343
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 74 MPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSE 229
M K PKCPKC K+VY+AE + G+ +HK CF C C K LDST ++
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE 235
KCP+C K VY AE+ A G WHK C C C K LDSTN + +
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 86 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 265
P+ C CG+ E + A G ++H CF+C +C++ L ST+ ELYCK +
Sbjct: 5 PSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCKKDYL 63
Query: 266 RKF 274
KF
Sbjct: 64 SKF 66
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 268
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 462 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 516
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVA-GGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
+C CG+ + + R+ G WH+ CF+C C + + ++ + +C C+ KF
Sbjct: 401 ECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 459
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 259
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 521 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 80 FKPADNPKCPKCGKSVYAAEERVAGG--LKWHKMCFKCGLCQKLLDST-NCSEHEGELYC 250
FK + +C C + + ++ WH CF C +C++ L S + + ++ C
Sbjct: 331 FKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILC 390
Query: 251 KVCHARKF 274
C+ +
Sbjct: 391 NNCYVANY 398
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 268
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 50 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 104
Score = 33.5 bits (73), Expect = 0.13
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
WH+ CF+C C + + ++ + +C C+ KF
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF 47
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 259
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 109 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC-QKLLDSTNCSEHEGELYCKVCHARKF 274
+C C + G WH C KC LC +L C +G++YCK +AR+F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQF 159
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 101 KCPKCGKSVYAAE-ERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKV 256
KC +CG+S++A + R A +H CF C C++ L + + +G + CK+
Sbjct: 162 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKL 215
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 161 KWHKMCFKCGLCQKLLDSTNCSEHE 235
K+HK CF C C+K LDSTN + H+
Sbjct: 5 KFHKKCFSCKDCRKKLDSTNAASHD 29
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKVCHARKF 274
C CG + +A +WH C KC C+ LD+ C +G + C+ + R+F
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRF 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERV-AGGLKWHKMCFKCGLCQKLLDSTNCSEHEG-ELYCK 253
KC C +++ + E + A +H CF C C+++L + G +YCK
Sbjct: 309 KCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
C KC + + + + AG +H CF C C K L + ++ EG C+ C+ ++
Sbjct: 237 CVKCNQVIKTSSVQHAGST-YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERY 292
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKW-HKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 259
+C C + + VA K+ H+ CF C C K L +GE C C
Sbjct: 295 RCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 ERVAGGLKWHKMCFKCGLCQKLL-DSTNCSEHEGELYC 250
ER+ WH CF C +LL D CS+ + E+YC
Sbjct: 97 ERLGPDSCWHVKCFTCEEDGELLVDLIYCSK-DDEIYC 133
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 ASTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGE 241
A M P+ C CG+ VY E VA +H+ CF+C C L + T E E
Sbjct: 598 APMMQCMPSLGTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESE 657
Query: 242 LYC 250
+C
Sbjct: 658 SFC 660
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 92 DNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTN-C--SEHEGELYC 250
++ +C CGKSV E +HK CF C +C L+ N C +H+ + YC
Sbjct: 241 ESNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHD-KFYC 295
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 253
C CG+++ ++ +A +WH CF C C LL S +G+ YC+
Sbjct: 89 CAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLL-SLEYMGMDGKPYCE 137
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 104 CPKCGKSVYAAEERV----AGGLK-WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 268
C +C K V E V AG K WH CF C +C LL +G +YC +A
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 269 KF 274
+F
Sbjct: 369 QF 370
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 98 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
P+C C + +++ A WH+ F C C + L G+ +C C+ + +
Sbjct: 372 PRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYY 430
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 35.1 bits (77), Expect = 0.042
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
+H CF C C+K L +EHEG C C+ ++
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRY 118
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 34.3 bits (75), Expect = 0.074
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
WH+ C +C +C+ L S +C + +LYC+ + + F
Sbjct: 66 WHESCLQCCICRSQL-SRSCFSKDRKLYCRTDYEKVF 101
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 33.9 bits (74), Expect = 0.097
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 253
C C K + + A G WH F C C+ L + N E +G+ YC+
Sbjct: 282 CAACNKPIIG-QVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVA-GGLKWHKM--CFKCGLCQKLLDSTNCSEHEGELYC 250
C CG+ + ++A G WH CF C C K L GE+YC
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +2
Query: 104 CPKCGKSVYAAE-----ERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 265
C +CG+ V A R WH CF C C++LL + ++YC HA
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHA 136
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 98 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCH 262
P+C C + ++A + A WH F C C L + + YC CH
Sbjct: 141 PRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC--CH 193
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
WH C +C C+ L + C EG+L+CK R++
Sbjct: 25 WHAQCVQCSDCKCPL-TERCFSREGKLFCKTDFYRRY 60
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 104 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQK 202
C CGK + A ER+A ++ HK F C +C+K
Sbjct: 106 CGNCGKDM-ATPERLAKHMETHKKKFGCDICEK 137
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 104 CPKCGKSVYAAEERV--AGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 253
C CG+ V E+RV A G WH F C C+K E +G YC+
Sbjct: 81 CFCCGRPV---EDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCE 129
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELY 247
WH CF+C +C L T ++ G Y
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTY 60
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 86 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE--GELYCKVC 259
P + C C + + A G WH+ C KC C L S + + CK
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRD 70
Query: 260 HARKF 274
+ R F
Sbjct: 71 YLRLF 75
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 164 WHKMCFKCGLCQKLLDSTNCSEHEGELYC 250
WHK CFKC C L+ ++ YC
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34)
Length = 521
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 260 GTLCSTVHPRALSSWLSPAIFGT 192
GT + PRA SWL P FGT
Sbjct: 362 GTAAYILRPRAPLSWLDPGAFGT 384
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 161 KWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 274
K+H F C C K L+ E + YC C + F
Sbjct: 43 KFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLF 80
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 101 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC 196
KCP C K E+R + HK ++CG C
Sbjct: 188 KCPHCKKVFSDKEKRKDHYISAHKKEYRCGKC 219
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 ERVAGGLKWHKMCFKCGLCQKLL-DSTNCSEHEGELYC 250
ER+ WH CF C +LL D CS+ + E+YC
Sbjct: 210 ERLGPDSCWHVKCFTCEEDGELLVDLIYCSK-DAEIYC 246
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 6.4
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 17 VRELDSRSDSTNRIS*ASTMPFKPADNP-KCPKCGKSVYAAEERVAGGLKWHKMCFKCGL 193
V E+ S+S +T+R S M D P +C CGKS E K +KC +
Sbjct: 621 VCEVCSKSFTTSR-SMVRHMLTHSEDRPYQCDVCGKSYKCYEALTKHTTTHSKKPYKCNV 679
Query: 194 CQK 202
C K
Sbjct: 680 CDK 682
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,604,688
Number of Sequences: 59808
Number of extensions: 312865
Number of successful extensions: 962
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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