Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0323
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    30   0.080
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.0  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   5.3  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   7.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   9.2  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 0.080
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 565 GERRISPRARPQAGE*RHQQHPGGHQDLREQLQR 666
           GER + P+ R Q  + +HQQ     Q  R+Q QR
Sbjct: 294 GERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 554 NTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSG 694
           NT     ASA   A++  + V    +E      S  ND+++ D++SG
Sbjct: 828 NTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISG 874


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 663 LKLLSQVLMTSRMLLVTSLSSL 598
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 316 DLLQHDEETDPGGSGRVNPVLS 381
           D LQ +E   P G+GR+  V S
Sbjct: 98  DQLQQEETDAPAGAGRIRKVRS 119


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 349 LDLFPHHVVASLLHGEPLIPDGDGADVTLC 260
           L + P H V  L HGE  + D     V LC
Sbjct: 46  LKINPLHTVPVLRHGELTLTDSHAILVYLC 75


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 52  IRECHFELK*IMNCA 8
           +R+CH +++ + NCA
Sbjct: 643 LRQCHLQMQSLANCA 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,428
Number of Sequences: 2352
Number of extensions: 12753
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)