Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0322
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1310 + 29238644-29240260 35 0.042
07_03_1160 - 24430240-24431268 32 0.22
06_03_1292 - 29064575-29064997 31 0.39
04_04_1129 - 31107892-31110246 31 0.51
08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819 30 0.90
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 30 0.90
12_01_0576 + 4705912-4706220,4706319-4706393,4707398-4707477,470... 29 1.6
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 29 1.6
07_03_1156 - 24416835-24417461 25 1.6
05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508 29 2.1
09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616 28 3.6
09_04_0541 + 18437075-18440062 28 3.6
07_03_1157 - 24419157-24419948 28 3.6
06_03_0781 - 24533949-24534330,24534666-24534817,24534901-245349... 28 3.6
10_01_0327 + 3580771-3581223 28 4.8
07_03_1158 - 24424060-24424461 28 4.8
06_03_0905 + 25843547-25844314 28 4.8
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 28 4.8
06_02_0037 - 10856616-10856915,10857527-10860238 28 4.8
04_03_0781 + 19572795-19573540,19573906-19573956,19574179-195742... 28 4.8
10_02_0201 - 6764313-6765263 27 6.3
10_01_0136 - 1639780-1639901,1640038-1640093,1641958-1642061,164... 27 6.3
08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575 27 6.3
07_01_0535 + 3952066-3952986 27 6.3
04_04_1701 + 35470535-35471170,35471254-35471403,35471745-354720... 27 6.3
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 27 6.3
03_06_0486 - 34261577-34261692,34261830-34262094,34263164-342632... 27 6.3
03_02_0816 + 11487811-11488708,11488835-11489235 27 6.3
02_02_0140 + 7125914-7126264,7126426-7126677,7126766-7126861,712... 27 6.3
06_03_0846 - 25328224-25330613,25330716-25330794 27 8.4
06_03_0809 + 24814590-24816593 27 8.4
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 27 8.4
04_03_0306 + 14136338-14136686,14137408-14137442,14137701-141377... 27 8.4
02_05_0084 - 25690346-25691206 27 8.4
01_06_1377 + 36764461-36765339 27 8.4
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 27 8.4
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804... 27 8.4
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 27 8.4
>06_03_1310 + 29238644-29240260
Length = 538
Score = 34.7 bits (76), Expect = 0.042
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = -1
Query: 358 TRRPGRRAPLSTQSYPIFHKRGP-RTDPCGTPRTTGKR*RVPPYPVHTTD-----LAPK* 197
TRRPG R PL+ P+ H P RT P P ++ +PP P ++ + P
Sbjct: 369 TRRPGGRTPLAPHRSPLPHHMPPRRTPPTPPPPSSPTPSHLPPPPPTYSESPKSSMPPST 428
Query: 196 DPTSRRR*RGTPCLSSAPP 140
P S P SS+PP
Sbjct: 429 SPPSSHG-ASPPSSSSSPP 446
>07_03_1160 - 24430240-24431268
Length = 342
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQI--GPNQPAEVEGHSM 159
P P PD P + N P + + GP+ P RP P + P+QP + E +
Sbjct: 262 PDGPPKPDQPPQPNPNGPPKPDQPPQPNPNGPSKPDQPPRPNPDMPPKPDQPPQPEYYEQ 321
Query: 158 P 156
P
Sbjct: 322 P 322
>06_03_1292 - 29064575-29064997
Length = 140
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 300 RGGREPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRG 169
RG +P+ A HH +ND+G T + P + + P GG G
Sbjct: 18 RGKDQPSAAAHHG--DNDDGLRETLLEQQQQPASSSSPTAGGGG 59
>04_04_1129 - 31107892-31110246
Length = 784
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 483 PRRDPASLSFRRRGPLPLWRDGQTP*NHPPGPRPT 379
PRR P R PLPL R + P + PP PRP+
Sbjct: 159 PRRPPRPGHQLLRTPLPLRRYPRPPRHPPPSPRPS 193
>08_01_0899 - 8862275-8862972,8863252-8863332,8863594-8863819
Length = 334
Score = 30.3 bits (65), Expect = 0.90
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 392 GHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTV 231
GH Q+ NN + +G Q P P P G E R +HD +G T+
Sbjct: 103 GHTQKQETAPNNGGGQADGTLQQPDTPQAP--GEEER--SGVSHDHLVNRGTTI 152
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 30.3 bits (65), Expect = 0.90
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 264 ARPENDEGSHRTRYIRPTWPPNRTQPAGGG 175
ARP+ +H R+++P PP P GGG
Sbjct: 46 ARPQPPRPAHPARFVKPMPPPPPPFPKGGG 75
>12_01_0576 +
4705912-4706220,4706319-4706393,4707398-4707477,
4707578-4707712,4708131-4708195,4708292-4708419,
4709108-4709364,4709457-4709982
Length = 524
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 197 GPNQPAEVEGHSMPLQCPPYNYGSLGHFCADGL 99
GP P + H L+CPPYN GS F D L
Sbjct: 285 GPQGPFD---HLFKLKCPPYNVGSQPSFKPDQL 314
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -3
Query: 239 PTVPGTYDRPGPQIGPN--QPAEVEGHSMPLQCPPYNYG 129
P PG Y+ GP GPN QP P PP NYG
Sbjct: 425 PPGPGNYNSYGPSQGPNYGQP------QYPQSAPPQNYG 457
>07_03_1156 - 24416835-24417461
Length = 208
Score = 24.6 bits (51), Expect(2) = 1.6
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = -3
Query: 326 HPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
HP VP++P+ P+ + P VP + P P++ E+ H P
Sbjct: 107 HPAVPELPKHEEPPHPVVPELPKHEEPPHPVVP---ELPKPEVPHPAVPELPKHEEP 160
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 332 PQHPVVPDIPQ 300
P HPVVP++P+
Sbjct: 92 PPHPVVPELPK 102
>05_03_0486 + 14616354-14617200,14617288-14617329,14619433-14620508
Length = 654
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 131 HSYRGGTGEAWSAPLPPPAGWVLFGGQVGRMYRVRWDPSSFS 256
H+Y G G SA P P G YR+R P S S
Sbjct: 158 HAYAGAAGSTASACAPLPLCCTFVAGGSSTSYRIRLGPQSCS 199
>09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616
Length = 695
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 344 EEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPG-TYDRPG 207
+E +HP+ EN P R T +RK++ P +P D+PG
Sbjct: 128 DEKRVEHPIHNHSKSANLENDPFRKGTQERKSL-SPNIPHFPADQPG 173
>09_04_0541 + 18437075-18440062
Length = 995
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -3
Query: 446 EGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNT 267
EG + +PK IP ++ TN R G +P+ P I N P +
Sbjct: 2 EGEEKVSPFLDVPKDIPIATKSLTIKTTNTNGGRGGGDWSNPISPAISFSPYLNSPSPPS 61
Query: 266 THDRKTMKGPTV-PGTYDRPGPQ 201
+ ++ P V P D P PQ
Sbjct: 62 SAFVSALQSPYVSPRLADPPPPQ 84
>07_03_1157 - 24419157-24419948
Length = 263
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
P HP VP++P+ P+ + P VP + P P+ P+ P EV H P
Sbjct: 195 PPHPAVPELPKHEEPPHPVVPELPKHEEPPHPVVP---ELPKPE-EPHHP-EVPEHEQP 248
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = -3
Query: 344 EEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVP--GTYDRPGPQIGPNQP-AEV 174
EE P HP VP++P+ P + P VP ++ P + P P E+
Sbjct: 34 EEEYPPHPTVPELPKPEVPPHPAVPELPKHEEPPHPVVPELPKHEEPPHPVVPELPKPEL 93
Query: 173 EGHSMPLQCPPY 138
H + + P +
Sbjct: 94 PPHPVVPELPKH 105
>06_03_0781 -
24533949-24534330,24534666-24534817,24534901-24534999,
24535127-24535302,24535983-24536292
Length = 372
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 137 YRGGTGEAWSAPLPPPAGWVLFGGQVGRMYRVRWDPSSFSGRAWCSAGVG 286
Y G+GEA + AG+ G + + RV W PS + W S G
Sbjct: 275 YTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFWSPSYYFVLPWFSICTG 324
>10_01_0327 + 3580771-3581223
Length = 150
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 290 ENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQ-----PAEVEGHSMPLQCPPYNYGS 126
EN P R T D P++ T P PQ N+ PAE S P PPY +
Sbjct: 3 ENLPPRTTKRDHVDPPKPSLTPTPTTP-PQRENNEETYELPAEFRVTSPPPPSPPYPFPI 61
Query: 125 LGHFCADGLIY 93
DG+I+
Sbjct: 62 SPSMEEDGMIF 72
>07_03_1158 - 24424060-24424461
Length = 133
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 356 AEAREEGAPQHPVVPDIPQ 300
A A EE P HP VP+IP+
Sbjct: 40 AAAEEEEHPAHPAVPEIPK 58
>06_03_0905 + 25843547-25844314
Length = 255
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -3
Query: 332 PQHPVVPD-IPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
P+HP P G P +N T + KGPT P RP P + P + P
Sbjct: 38 PKHPKPSHPSPSPGHPKGP-KNPTP--RPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGP 94
Query: 155 LQCPP 141
+ PP
Sbjct: 95 VTRPP 99
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 285 PTPAEHHARPENDEGSHRTRYIR-PTWPPNRTQPAG 181
P P +H ARP + G R P WPP P G
Sbjct: 281 PAPIQHFARPLHVWGHPTMDPSRVPVWPPRHLVPRG 316
>06_02_0037 - 10856616-10856915,10857527-10860238
Length = 1003
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 294 GREPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGR 172
GREP AR + D G + N QPAG G+
Sbjct: 23 GREPIIRAGFARTDTDNGGSDVLFCGSEMDHNNLQPAGSGQ 63
>04_03_0781 +
19572795-19573540,19573906-19573956,19574179-19574251,
19574772-19574876
Length = 324
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -3
Query: 335 APQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
APQ P P R+ HD + G PG++ RPGP + A + H M
Sbjct: 122 APQPPTPTPTP---TPTPTPRHHHHDVLVLPGMPPPGSFLRPGPAMPGIPQASIPTH-ML 177
Query: 155 LQCPPY 138
PP+
Sbjct: 178 RAAPPW 183
>10_02_0201 - 6764313-6765263
Length = 316
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 121 ATFALMASYILFLCIFVT*YKLQLPLFTRHYLWLTGREC 5
A +AL+A ++FLCIF YK + TR W C
Sbjct: 274 AAYALVAG-LVFLCIFGKVYKFLAWMETRQVQWKPSVSC 311
>10_01_0136 -
1639780-1639901,1640038-1640093,1641958-1642061,
1642119-1642301,1642963-1643073,1643175-1643330,
1644627-1644866,1646496-1646603,1646764-1647903
Length = 739
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 128 SLGHFCADGLIYTLFVYICN 69
+LGH+C G YTL V++ N
Sbjct: 516 TLGHWCLHGNFYTLIVFLQN 535
>08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575
Length = 358
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +3
Query: 135 VIGGALERHGVPLYLRRLVGSYLGARSVVCTGYGGTLHRFPVVRGVPQGSVLGPLLWNIG 314
V GG+ P L +VG+ G VV TG G T F + V ++ PL IG
Sbjct: 149 VPGGSSREIPSPCPLANIVGTCNGLLCVVGTGAGFTTGGFVLSNPVTGEALHVPLPTRIG 208
Query: 315 YDW 323
W
Sbjct: 209 APW 211
>07_01_0535 + 3952066-3952986
Length = 306
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = -3
Query: 494 FIERHVETQPPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVV 315
F + +E QPPYP +D+ G+ P HD++ + + + +E P
Sbjct: 53 FQRQGMELQPPYPYEDQELQSEGDEQETPNRY---HDEQEEKPHHYLDEEQEKKPFQ--- 106
Query: 314 PDIPQEGAENRPLRNTTHDRKTMK 243
Q+G P + D+KT++
Sbjct: 107 ---DQDGERKTPKQYLDEDQKTVQ 127
>04_04_1701 +
35470535-35471170,35471254-35471403,35471745-35472015,
35472152-35472262,35472476-35472650,35472748-35473020,
35473251-35473494,35473623-35473708,35473752-35473968
Length = 720
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 380 RVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLR 273
R +R T + E RE PQHP +P P+R
Sbjct: 170 RNLRTTKHYEHRERHCPQHPPTCLVPLPKGYTNPIR 205
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 166 TPCLSSAPPITMVA 125
TPCLSS PP+T VA
Sbjct: 42 TPCLSSIPPLTDVA 55
>03_06_0486 -
34261577-34261692,34261830-34262094,34263164-34263277,
34263371-34264795
Length = 639
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 300 RGGREPTPAEHHARPENDEG-SHRTRYIRP 214
RGGR PA + P DEG H Y+RP
Sbjct: 17 RGGRHVAPAALPSDPAYDEGLGHSFCYVRP 46
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHD-QRVVRVTNNAEAREEGAPQHPVVPDIPQEGA 291
PP P + R G L K +R++ AE R A P P+ +G+
Sbjct: 157 PPPPPETAAEKRRKLLGALEKCDEDLKTLRRIIAAVRAAEMRAAAASDAPPTPEATGKGS 216
Query: 290 ENRPLRNTTHDRKTMKGPT 234
+NR + + D PT
Sbjct: 217 DNRWKDDGSRDVDPSPSPT 235
>02_02_0140 +
7125914-7126264,7126426-7126677,7126766-7126861,
7127013-7127187,7127283-7127363,7127451-7127548,
7127828-7127920,7128607-7128678,7128998-7129117,
7129210-7129260,7130026-7130211,7130355-7130411
Length = 543
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -2
Query: 279 PAEHHARPENDEGSHRTRYIRPT--WPPNRTQPAGGGRGALHAS 154
P HH P S + P+ PP+ P GGRG H+S
Sbjct: 17 PLHHHLLPSPPPSSSLLPPLLPSPPRPPSPPSPLPGGRGVPHSS 60
>06_03_0846 - 25328224-25330613,25330716-25330794
Length = 822
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 252 FPVVRGVPQGSVLGPLLWNIGYD 320
FP G+PQ VL P+L NI D
Sbjct: 287 FPKGHGLPQEGVLAPILMNIYLD 309
>06_03_0809 + 24814590-24816593
Length = 667
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 355 ALFVTRTTRWSWPGGMILGSLPVSPQRE 438
ALF+ R RW W G L +P++P +E
Sbjct: 307 ALFLLRR-RWRWRGNGELHDVPLAPDKE 333
>05_03_0359 -
12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 311 DIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPG 207
D+P + A + +H + +GPTVPG+Y G
Sbjct: 162 DLPNDAASEVDI---SHGSEDPRGPTVPGSYQMNG 193
>04_03_0306 +
14136338-14136686,14137408-14137442,14137701-14137778,
14138046-14138124,14138731-14138823,14139472-14139556,
14140270-14140345,14140669-14140794,14141039-14141137,
14141238-14141339,14141561-14141671,14141809-14141904,
14142488-14142539,14142624-14142735,14142879-14142943,
14144124-14144521,14145236-14145330,14145989-14146015,
14146081-14146156,14146368-14146421,14146741-14146863,
14146955-14147023
Length = 799
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 276 AEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGAL 163
A+HH + H+ R I+P W T GGRG +
Sbjct: 424 AKHHVDVQGFNVYHKNRLIKPFWRV-WTAAGSGGRGVI 460
>02_05_0084 - 25690346-25691206
Length = 286
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 479 VETQPPYPSDDEGHSRCGETGRLPKIIPPGH 387
VE Q DD+G R G TG P + P H
Sbjct: 144 VERQSDRLGDDDGGHRHGSTGSSPPVRSPWH 174
>01_06_1377 + 36764461-36765339
Length = 292
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 149 TGEAWSAPLPPPAGWVLFGGQVGRMYRVRWDPSSFSGRAWCSAGVGS 289
+G +SAP PPP G Y ++DP + SG GVG+
Sbjct: 196 SGGYYSAPPPPPQYEYTAGPSAPVEYNRQYDPRAGSGSGNGRYGVGT 242
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -3
Query: 335 APQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPN 189
AP H VP +P A ++ + G PG PG GP+
Sbjct: 645 APNHFNVPSVPHAEARGPQDLPSSEPERLTPGDITPGFNVSPGDMAGPS 693
>01_06_0938 -
33179237-33179362,33179485-33179668,33180114-33180409,
33180702-33180821,33180931-33181018,33181352-33181426,
33181565-33181632,33181770-33181852,33182010-33182058,
33183006-33183126,33183225-33183310,33183782-33183910,
33184033-33184155,33184277-33184486,33185217-33185240
Length = 593
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 119 GLSYHSYRGGTGEAWSAPLPPPAGWVL 199
G + H+Y GE W+ PLP G VL
Sbjct: 403 GATDHAYMRLDGEPWNQPLPKDDGKVL 429
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 27.1 bits (57), Expect = 8.4
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = -3
Query: 413 LPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPT 234
L K+ PP D ++N + + + QH V P + A +P + + P
Sbjct: 221 LAKLQPPKSD---ALASDNVGSSQTDSHQHAVAP----QQAAIQPQHQALTSSQPLALPA 273
Query: 233 VPGTYDRPGPQIGPNQP-AEVEGHSMPLQCPP 141
+P P P +QP ++ GH Q PP
Sbjct: 274 LPAPNAPPPPPTLQSQPPSQYPGHLPHSQVPP 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,949,272
Number of Sequences: 37544
Number of extensions: 470728
Number of successful extensions: 1788
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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