Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0322
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 40 0.001
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 39 0.002
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 36 0.012
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 35 0.038
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 35 0.038
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 35 0.038
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 33 0.087
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.27
AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical ... 31 0.46
Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 31 0.61
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 31 0.61
Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 30 1.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 1.1
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.1
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 1.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 1.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 1.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 1.4
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 1.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 1.9
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 29 1.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 1.9
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 1.9
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 1.9
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 29 2.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 2.5
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 2.5
AC084196-3|AAK39621.1| 285|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 28 3.3
U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical pr... 28 3.3
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 28 3.3
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 28 4.3
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 4.3
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 4.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 4.3
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 4.3
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 4.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 4.3
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 27 5.7
AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical ... 27 5.7
Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 27 7.6
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 7.6
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 27 7.6
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 27 7.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 27 7.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 27 10.0
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 27 10.0
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 27 10.0
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 27 10.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 27 10.0
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 252 FPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLRVICYADDTLV 386
+P+ GVPQGSV GPLL+ + + +L L P + + C+ADD +
Sbjct: 875 YPISSGVPQGSVSGPLLFILFINNLLID-LAPTINISCFADDVKI 918
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 150 LERHGVPLYLRRLVGSYLGARSVVCTGYGGTLHRF-PVVRGVPQGSVLGPLLWNIGYDWV 326
+E G+ ++ +G+YL R ++ T + ++ ++ GVPQGSV+ P L+ ++
Sbjct: 493 MEAQGIEPKIKLWLGNYLHKR-LIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTF---YL 548
Query: 327 LRGALLPGLRVICYADDTLVVARGDDFRESARLATAGVALVVGRIRRLGLDVALNKS 497
+I YADD ++AR ++A + + ++ G+ ++ KS
Sbjct: 549 KDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKS 605
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.012
Identities = 30/101 (29%), Positives = 38/101 (37%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P G S G+ G PG D + N + + G P P P P + A
Sbjct: 152 PPGPPGPPGPS--GDAGSNGNPGSPGQDGQPGAPGNKGPSGQNGNPGAPGAPGQPGQDAP 209
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGH 165
+ P+ P PG PGPQ P QP + GH
Sbjct: 210 SEPIT-----------PGAPGPQGAPGPQGPPGQPGQ-PGH 238
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 34.7 bits (76), Expect = 0.038
Identities = 30/101 (29%), Positives = 37/101 (36%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P G S G+ G PG D + N + G P P P P + A
Sbjct: 119 PPGPPGPPGPS--GDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAP 176
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGH 165
+ P+ P PG PGPQ P QP + GH
Sbjct: 177 SEPIT-----------PGAPGPQGTPGPQGPPGQPGQ-PGH 205
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 34.7 bits (76), Expect = 0.038
Identities = 30/101 (29%), Positives = 37/101 (36%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P G S G+ G PG D + N + G P P P P + A
Sbjct: 152 PPGPPGPPGPS--GDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAP 209
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGH 165
+ P+ P PG PGPQ P QP + GH
Sbjct: 210 SEPIT-----------PGAPGPQGTPGPQGPPGQPGQ-PGH 238
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 34.7 bits (76), Expect = 0.038
Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = -3
Query: 353 EAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEV 174
+A G P HP P P G + + + GP+ G PGP GP QP
Sbjct: 177 DAGSPGQPGHPGSPGNPGRGGQRS---------RGLPGPS--GRPGPPGPAGGPGQPGHS 225
Query: 173 EGHSMP-LQCPPYNYGSLGHFCADGL 99
G P Q PP G GH DG+
Sbjct: 226 GGAGSPGPQGPPGPSGQPGHSGNDGV 251
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 33.5 bits (73), Expect = 0.087
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN+P++
Sbjct: 1058 PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1108
Score = 33.5 bits (73), Expect = 0.087
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN+P++
Sbjct: 1086 PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1136
Score = 33.5 bits (73), Expect = 0.087
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P ++ ++ GP P ++PGP GPN P++
Sbjct: 1156 PNGPNGPSDPNKPGPNGPNESSDPNKPGPNGPNEPSDPNKPGPN-GPNGPSD 1206
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN+P++
Sbjct: 1310 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1360
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 335 APQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
+P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1043 SPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GPNGPSD 1094
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1072 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GPNGPSD 1122
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1100 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GPNGPSD 1150
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1114 PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN-GPNGPSD 1164
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -3
Query: 365 TNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQ 186
+N + P P P P + N P + +R GP P ++PGP GPN
Sbjct: 1229 SNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGPLDPNKPGPN-GPNG 1287
Query: 185 PAE 177
P++
Sbjct: 1288 PSD 1290
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1296 PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN-GPNGPSD 1346
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN P++
Sbjct: 1282 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GPNGPSD 1332
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN+P++
Sbjct: 1268 PNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1318
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P + N P + ++ GP P ++PGP GPN+P++
Sbjct: 1170 PNGPNESSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1220
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P+ P N P + ++ GP P ++PGP GPN+P++
Sbjct: 1215 PNEPSDPNKPGPNGSNGP---SDPNKPGPNGPNGPSDPNKPGPN-GPNEPSD 1262
Score = 30.3 bits (65), Expect = 0.81
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P N P ++ GP P ++PGP GPN P++
Sbjct: 1254 PNGPNEPSDPNRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPN-GPNGPSD 1304
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP P ++PGP GPN+ ++
Sbjct: 1128 PNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPN-GPNESSD 1178
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
P P P P + N P + ++ GP ++PGP GPN+P++
Sbjct: 1142 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSDPNKPGPN-GPNEPSD 1192
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -3
Query: 362 NNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
N + + P P P P + N P + ++ GP P ++PGP G N P
Sbjct: 1174 NESSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GSNGP 1232
Query: 182 AE 177
++
Sbjct: 1233 SD 1234
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPN 189
P P P P + N P + ++ GP P ++PGP GPN
Sbjct: 1324 PNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPN-GPN 1370
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVE 171
P P P P + N P + ++ GP ++PGP GP+ P+ E
Sbjct: 1338 PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPN-GPSNPSVPE 1390
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.27
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +3
Query: 267 GVPQGSVLGPLLWNIGYDWVLRGALLPGLRVIC--YADDTLVVARGDDFRESARLATAGV 440
GVPQG+VL PLL+ I + + ++LP +V C +ADDT + A L +A
Sbjct: 76 GVPQGAVLSPLLFGIYVNDI--SSILPE-KVACKQFADDTKLYASTPKTESENNLQSALD 132
Query: 441 ALV 449
A+V
Sbjct: 133 AVV 135
>AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical
protein Y32G9A.5 protein.
Length = 275
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = -3
Query: 359 NAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPA 180
NA A APQ+P PQ + R N T P PG+ P P P
Sbjct: 93 NAFASTSDAPQYPGSSQYPQGSSAPRYPGNYNAFASTSDEPQYPGSSQYPQGSSAPRYPG 152
Query: 179 EVEGHSMPLQCPPY 138
+ P Y
Sbjct: 153 NYNAFASTSDAPQY 166
Score = 30.7 bits (66), Expect = 0.61
Identities = 26/112 (23%), Positives = 34/112 (30%), Gaps = 2/112 (1%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLP--KIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEG 294
P YP + + + + P P G NA A APQ+P PQ
Sbjct: 117 PRYPGNYNAFASTSDEPQYPGSSQYPQGSSAPRYPGNYNAFASTSDAPQYPGSSQYPQGS 176
Query: 293 AENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPY 138
+ R N T P PG+ P P P + P Y
Sbjct: 177 SAPRYPGNYNAFASTSDAPQYPGSSQYPQGSSAPRYPGNYNAFASTSDEPQY 228
>Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical
protein R17.3 protein.
Length = 440
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 320 VVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCP 144
+ PD+ E ++ R + D M G Y+R G G +P +VE +PL P
Sbjct: 86 IFPDVFDEESDERIGKLVLPDIIEMDGSGADKVYERYGLGSGDGEPEDVETQEIPLTTP 144
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 255 PVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLRVICYADDTLV 386
P+ GVP+GSV GP L+ I + +L ++ P + +ADD V
Sbjct: 52 PISSGVPKGSVSGPFLFLIFINSLLL-SVPPSISCSAFADDLKV 94
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.7 bits (66), Expect = 0.61
Identities = 30/88 (34%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = -3
Query: 350 AREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQ---IGPNQPA 180
A + G+P P P G+ P R R T PG RPGPQ P QP
Sbjct: 175 AGDAGSPGQPGHP-----GSPGNPGRGGQRSRGT------PGASGRPGPQGPAGAPGQPG 223
Query: 179 EVEGHSMP-LQCPPYNYGSLGHFCADGL 99
G P Q PP G GH DG+
Sbjct: 224 RSGGAGTPGPQGPPGPSGQPGHSGNDGV 251
>Z82280-3|CAB05265.1| 387|Caenorhabditis elegans Hypothetical
protein R05A10.3 protein.
Length = 387
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -3
Query: 353 EAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIG-PNQPAE 177
E E G P+ +P P + AE L + T+ + GPT P +D + G P P +
Sbjct: 85 EGMEPGVPEQSTMP--PVDPAEYAKLEDDTNGEDDITGPTTP--FDINNMETGVPEGPTK 140
Query: 176 VEGHSMPLQCPPYNYGSLGHF 114
P+ P + G F
Sbjct: 141 EPYMPKPITKPKPGQNNSGSF 161
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -3
Query: 344 EEGAPQHPVVPDIP----QEGAENRPLRNTTHDRKTMKGPTVP-GTYDRPGPQIGPNQPA 180
++GAP + P P Q+ +N+P + GP P G + GP P QP
Sbjct: 136 QDGAPGNDGAPGAPGNPGQDAQDNQPAGPDSFCFDCPAGPPGPSGAPGQKGPSGAPGQPG 195
Query: 179 EVEGHSMP 156
G S+P
Sbjct: 196 RSGGASLP 203
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = -3
Query: 341 EGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHS 162
+G+P +P P G E+ + D T P PG GP P P G++
Sbjct: 158 DGSPGNPGTPGQDAVGDESPTAADFCFDCPTGP-PGPPGKQGPKGPNGEPGAPGTPGGNA 216
Query: 161 MPLQCPPYNYGSLGHFCADGL 99
+P PP G G ADGL
Sbjct: 217 LP--GPPGPPGPQGPPGADGL 235
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 346 GRRAPLSTQSYPIFHKRGPRTDPCGTPRT 260
G+ A +S + P G RTDPCGTP T
Sbjct: 45 GKFADISLTNMP--KSTGERTDPCGTPHT 71
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 341 EGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKG----PTVPGTYDRPGPQIGPNQPAE 177
+G P P D P+ G +P R + + G PG+ +PGP+ GP +P +
Sbjct: 202 QGPPGPPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGEPGQ 260
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 353 EAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
E +E AP P D+P+ A PL T D P+ P D P + P++P +
Sbjct: 3524 EVPKEAAPSEPTQEDVPKGAA---PLEPTQEDVPKEAAPSGPTQEDVPKEE-APSEPTQ 3578
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 353 EAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
E +E AP P D+P+ A PL T D P+ P D P + P++P +
Sbjct: 3524 EVPKEAAPSEPTQEDVPKGAA---PLEPTQEDVPKEAAPSGPTQEDVPKEE-APSEPTQ 3578
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 353 EAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
E +E AP P D+P+ A PL T D P+ P D P + P++P +
Sbjct: 3524 EVPKEAAPSEPTQEDVPKGAA---PLEPTQEDVPKEAAPSGPTQEDVPKEE-APSEPTQ 3578
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 1.9
Identities = 35/123 (28%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
Frame = -3
Query: 464 PYPSDDEGHSRC-GETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
P P+ +G S G G+ PG D + + A + PQ P P GA
Sbjct: 185 PGPAGPKGASGAPGNPGQAGAPGQPGADAQSESIPG---APGQAGPQGPPGP-AGSPGAP 240
Query: 287 NRPLRNTTHDRKTMKG-PTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFC 111
P + +K G P PG PG P QP + G CP Y G F
Sbjct: 241 GGPGQPGAPGQKGPSGAPGQPGADGNPG---APGQPGQAGGAGEKGICPKYCAIDGGVFF 297
Query: 110 ADG 102
DG
Sbjct: 298 EDG 300
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 302 QEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGP 192
Q G + +P RN ++ P PG +PGP GP
Sbjct: 198 QSGKDGQPGRNGADGKRGYGAPGAPGAQGKPGPS-GP 233
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 239 PTVPGTYDRPGPQIGPNQPAEVEGHSM 159
PT PG RPGP GP P M
Sbjct: 1256 PTYPGMTPRPGPNFGPPGPVYPNSQQM 1282
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 239 PTVPGTYDRPGPQIGPNQPAEVEGHSM 159
PT PG RPGP GP P M
Sbjct: 1256 PTYPGMTPRPGPNFGPPGPVYPNSQQM 1282
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 1.9
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = -3
Query: 446 EGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQ-HPVVPDIPQEGAENRPLRN 270
E HSR +G LP +PPG + VT G PQ P V QE A + +
Sbjct: 537 EAHSRMTSSGALPAGLPPGFE-----VT--------GPPQPTPQVQISAQEAAIPEKM-D 582
Query: 269 TTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLG 120
T+ + P+ P P Q PA V+ P Q PP Y G
Sbjct: 583 TSEAATAARPPSTPQAPQAPPVQAA---PAPVQAPQAP-QAPPQAYQGYG 628
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 254 KTMKGPTVPGTYDRPGPQ-IGPNQPAEVEGHS 162
+T G P + RP PQ +GP P+ VEG S
Sbjct: 417 QTAPGQAAPKLHQRPPPQEVGPLAPSGVEGKS 448
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 1.9
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = -3
Query: 446 EGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQ-HPVVPDIPQEGAENRPLRN 270
E HSR +G LP +PPG + VT G PQ P V QE A + +
Sbjct: 537 EAHSRMTSSGALPAGLPPGFE-----VT--------GPPQPTPQVQISAQEAAIPEKM-D 582
Query: 269 TTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLG 120
T+ + P+ P P Q PA V+ P Q PP Y G
Sbjct: 583 TSEAATAARPPSTPQAPQAPPVQAA---PAPVQAPQAP-QAPPQAYQGYG 628
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 1.9
Identities = 29/101 (28%), Positives = 36/101 (35%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P+ D G G G PG D + + A G P P P P E +
Sbjct: 163 PPGPAGDAGSD--GSPGA------PGSDGQPGAAGDKGPAGPNGNPGAPGSPGKPGEDGK 214
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGH 165
+ P+ P PG PGPQ P P + GH
Sbjct: 215 SEPIT-----------PGAPGPAGPPGPQGPPGAPGQ-PGH 243
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 239 PTVPGTYDRPGPQIGPNQPAEVEGHSM 159
PT PG RPGP GP P M
Sbjct: 1256 PTYPGMTPRPGPNFGPPGPVYPNSQQM 1282
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = -3
Query: 254 KTMKGPTVP----GTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFCADG 102
K +GP P G RPGP P QP + P Q P G+ GH DG
Sbjct: 148 KCPRGPAGPTGSIGQAGRPGPDGRPGQPGRKGNNGRPGQ--PAPQGNAGHPGRDG 200
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = -3
Query: 302 QEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQC----PPYN 135
Q GA P R +++ +G +PG RPGPQ P P + S P PP
Sbjct: 183 QAGAPGNPGRPGQSGQRS-RG--LPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPPGP 239
Query: 134 YGSLGHFCADG 102
G GH DG
Sbjct: 240 NGQPGHPGQDG 250
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 276 AEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGALH 160
A++ + + D+G+ R ++ PN+ +P GG RG H
Sbjct: 536 AKNQGQFDKDQGNLRDECLKYWQVPNKQRPRGGDRGNRH 574
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 2.5
Identities = 34/122 (27%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Frame = -3
Query: 464 PYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAEN 285
P P+ +G G G + PG + +N A + PQ P P GA
Sbjct: 190 PGPAGPKGQR--GAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGPQGPPGPS-GAPGAPG 246
Query: 284 RPLRNTTHDRKTMKG-PTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFCA 108
P +K G P PG+ PG P QP + G CP Y G F
Sbjct: 247 GPGYPGPPGQKGPSGAPGQPGSDGNPG---APGQPGQSGGSGNRGICPKYCAIDGGVFFE 303
Query: 107 DG 102
DG
Sbjct: 304 DG 305
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Frame = -3
Query: 332 PQHPVVP--DIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQI---GPNQPAEVEG 168
P P P D G P R + +PG RPGPQ GP QP + G
Sbjct: 175 PAGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGG 234
Query: 167 HSMPLQCPPYNYGSLGH 117
P Q P G+ GH
Sbjct: 235 SGTPGQ--PGAPGAPGH 249
>AC084196-3|AAK39621.1| 285|Caenorhabditis elegans Hypothetical
protein Y55D5A.1a protein.
Length = 285
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 276 AEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGA 166
+ H +R N GSH R R P + Q AGG GA
Sbjct: 10 SRHSSRLHNLRGSHGNRKQRQAPPTLQPQQAGGAAGA 46
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVP--GTYDRPGPQIGPNQP 183
P HP P + Q N+P++ + P +P TY PQ+ QP
Sbjct: 697 PSHPAPPPVNQSQPANQPMQTAVYQNSHPGAPYIPQQPTYQ---PQLPVQQP 745
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVP--GTYDRPGPQIGPNQP 183
P HP P + Q N+P++ + P +P TY PQ+ QP
Sbjct: 701 PSHPAPPPVNQSQPANQPMQTAVYQNSHPGAPYIPQQPTYQ---PQLPVQQP 749
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 302 QEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQ 186
Q+G + RP +N R T P PG PG P Q
Sbjct: 187 QQGQDGRPGQNGRRGRGTPGAPGAPGAAGAPGNNGQPGQ 225
>U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical
protein C43G2.1 protein.
Length = 434
Score = 28.3 bits (60), Expect = 3.3
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = -3
Query: 494 FIERHVETQPPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTN--NAEAREEGAPQHP 321
F R P SDDE C ++ LP+ GH R A + +E P+H
Sbjct: 47 FYSRKTTVVSPTNSDDEDADFCSDSELLPQ--QEGHRSRATSFAGRIRAGSDDEAMPKHT 104
Query: 320 VVPDIPQEGAENRP--LRNTTHDRK 252
++ ++G + R L+ T RK
Sbjct: 105 ILRYRRKKGGQWREINLQGTPDKRK 129
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = -3
Query: 398 PPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTY 219
PP DQ ++ N+ P P P E N + T R++ PTVP T
Sbjct: 334 PPIVDQEFPQIAINSVGVRRKGPIRPAQRVKPSEVGGNAMVTRTWIPRQSFTFPTVPTTT 393
Query: 218 DRPGPQIGPNQPA 180
P + P+ A
Sbjct: 394 QTPTTRPVPSAVA 406
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = -3
Query: 398 PPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTY 219
PP DQ ++ N+ P P P E N + T R++ PTVP T
Sbjct: 335 PPIVDQEFPQIAINSVGVRRKGPIRPAQRVKPSEVGGNAMVTRTWIPRQSFTFPTVPTTT 394
Query: 218 DRPGPQIGPNQPA 180
P + P+ A
Sbjct: 395 QTPTTRPVPSAVA 407
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 27.9 bits (59), Expect = 4.3
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 9/113 (7%)
Frame = -3
Query: 476 ETQPPYPSDDEGH-------SRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAP--QH 324
E PP P D G+ R G G + PPG + E+G P
Sbjct: 151 EPGPPGPPGDAGNPGQSGHPGRNGNDGGVGPQGPPGPPGNNGEGGRDGPRGEQGRPAIST 210
Query: 323 PVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGH 165
P +P P GA P + + G PG+ PGPQ P P + +GH
Sbjct: 211 PALPGDP--GAPGEPGPSGLPGDQGQAGR--PGSDGAPGPQGPPGPPGQ-QGH 258
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 27.9 bits (59), Expect = 4.3
Identities = 37/129 (28%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP PS CG+ GR P P G + R N+ + G + P ++G
Sbjct: 154 PPGPS-----GTCGQVGR-PG--PDGRPGQPGRRGNDGRPGQPGPQGNAGQPG--RDGNP 203
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE--VEGHSMPL-----QCPPYNYG 129
+P R+ P PG +PG Q P P G S P P N G
Sbjct: 204 GQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNRG 263
Query: 128 SLGHFCADG 102
S GH A G
Sbjct: 264 SDGHPGAPG 272
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 400 SPRATTNVSSA*QITRRPGRRAPLSTQSYPIFHKRGPRTDPCGTPRTTGKR*RVPP 233
+P +T N A Q TR P P+ + P KR P P G P + R PP
Sbjct: 946 TPTSTNNHEIA-QSTRSPALPPPVPPREAPPIPKRNP--PPLGAPPKVPEGARAPP 998
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 338 GAPQHPVVPDIPQ-EGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
G P+ P P PQ E E+ N + P+ PG +PG GP +P
Sbjct: 176 GGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEPGQPGEPGGPGEP 228
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.3
Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRK-TMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
PQ P P P GA P T R T P +PG PGP QP P
Sbjct: 153 PQGPPGPPGPP-GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTP 211
Query: 155 LQCPPYNYGSLG 120
Q P G+ G
Sbjct: 212 AQSEPLTPGAPG 223
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 400 SPRATTNVSSA*QITRRPGRRAPLSTQSYPIFHKRGPRTDPCGTPRTTGKR*RVPP 233
+P +T N A Q TR P P+ + P KR P P G P + R PP
Sbjct: 946 TPTSTNNHEIA-QSTRSPALPPPVPPREAPPIPKRNP--PPLGAPPKVPEGARAPP 998
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 400 SPRATTNVSSA*QITRRPGRRAPLSTQSYPIFHKRGPRTDPCGTPRTTGKR*RVPP 233
+P +T N A Q TR P P+ + P KR P P G P + R PP
Sbjct: 946 TPTSTNNHEIA-QSTRSPALPPPVPPREAPPIPKRNP--PPLGAPPKVPEGARAPP 998
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.3
Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRK-TMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
PQ P P P GA P T R T P +PG PGP QP P
Sbjct: 153 PQGPPGPPGPP-GAPGDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTP 211
Query: 155 LQCPPYNYGSLG 120
Q P G+ G
Sbjct: 212 AQSEPLTPGAPG 223
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 315 TRYSTRGGREPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPA---GGG 175
TR S+ G + +H ARP + + + + RP N T A GGG
Sbjct: 53 TRKSSGSGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGG 102
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 315 TRYSTRGGREPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPA---GGG 175
TR S+ G + +H ARP + + + + RP N T A GGG
Sbjct: 53 TRKSSGSGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGG 102
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
C09G1.2 protein.
Length = 1115
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 374 VRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLR 273
V + N P+ P PD P+E E P+R
Sbjct: 1043 VHMNENLNEVRRAPPEQPQEPDEPEESEEQEPVR 1076
>AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical
protein Y45F10A.2 protein.
Length = 502
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SPQREWPSSSEG*GGWVSTWRSINP 498
+PQ W + +G GG S WR+ P
Sbjct: 58 TPQSAWAPNRQGFGGQFSKWRTSTP 82
>Z70750-2|CAA94737.1| 756|Caenorhabditis elegans Hypothetical
protein C50F4.2 protein.
Length = 756
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 84 KKSIYEAISAKVA*ATIVIGGALERHGVPLYLRRLVGSYLGARSV 218
K+ I + +V AT+ G L+R G P +L RL+G +G +V
Sbjct: 273 KEEIETRLQLEVRIATL---GHLQRGGAPSFLDRLIGLRMGYEAV 314
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.1 bits (57), Expect = 7.6
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -3
Query: 296 GAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGP--NQPAEVEGHSMPLQCP--PYNYG 129
G RP ++ + + P PG GP GP N A G + P P P N G
Sbjct: 203 GQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAGPAGNPGTPGNKG 262
Query: 128 SLGH 117
S GH
Sbjct: 263 SDGH 266
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -3
Query: 419 GRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
GR P +IP +++ + ++NA+ ++E Q P P+ QE ++
Sbjct: 547 GRTPAMIPASVQRQLQKSSSNADQKKEKTSQSP--PESNQETSD 588
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.1 bits (57), Expect = 7.6
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIP-QEGA 291
PP P+ + GH G G K PG V + A GAP P P Q G
Sbjct: 159 PPGPAGEPGHD--GAPGAPGKPGAPG-------VGGGSGA--PGAPGPKGAPGGPGQPGR 207
Query: 290 ENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
+ +P + P PG +PGP+ P Q G+ P
Sbjct: 208 DGQP-GQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQP 251
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 315 TRYSTRGGREPTPAEHHARPENDEGSHRTRYIRPTWPPN--RTQPAGGGRGALHAS 154
TR S+ G + +H ARP + + + + RP N T A GG G A+
Sbjct: 53 TRKSSGSGLKTANLKHPARPSTESSTSSSHHQRPAQEMNGTSTPTATGGGGTSGAT 108
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 27.1 bits (57), Expect = 7.6
Identities = 29/110 (26%), Positives = 37/110 (33%), Gaps = 1/110 (0%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNN-AEAREEGAPQHPVVPDIPQEGA 291
PP P+ G S G+ G + PG +VV V A G P P P +
Sbjct: 242 PPGPAGSPGRS--GQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGPPGPSGAPGHPGQAG 299
Query: 290 ENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPP 141
+ P + P PG PG Q P + E CPP
Sbjct: 300 SSLP--GAPGPQGDAGAPGQPGA---PGQQGEPGEDGESGSEGACDHCPP 344
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Frame = -3
Query: 398 PPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVP-GT 222
PP + + + NA R P+ P P G P +T + + P P GT
Sbjct: 140 PPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG---EPQDLSTEGNASRRPPPPPKGT 196
Query: 221 YDRPGPQIGPNQPAEVEGHSMPLQCPP 141
P P G Q EG++ PP
Sbjct: 197 GTPPPPPTGEPQDLSAEGYASRRPPPP 223
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 26.6 bits (56), Expect = 10.0
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Frame = -3
Query: 464 PYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAEN 285
P P+ +G G G + PG + ++ A + PQ P P GA
Sbjct: 185 PGPAGPKGAP--GAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGP-AGSPGAPG 241
Query: 284 RPLRNTTHDRKTMKG-PTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFCA 108
P + K G P PG PG P QP + G CP Y G F
Sbjct: 242 GPGQAGAPGPKGPSGAPGQPGADGNPG---APGQPGQSGGAGEKGICPKYCAIDGGVFFE 298
Query: 107 DG 102
DG
Sbjct: 299 DG 300
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 26.6 bits (56), Expect = 10.0
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Frame = -3
Query: 464 PYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAEN 285
P P+ +G G G + PG + ++ A + PQ P P GA
Sbjct: 185 PGPAGPKGAP--GAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGP-AGSPGAPG 241
Query: 284 RPLRNTTHDRKTMKG-PTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFCA 108
P + K G P PG PG P QP + G CP Y G F
Sbjct: 242 GPGQAGAPGPKGPSGAPGQPGADGNPG---APGQPGQSGGAGEKGICPKYCAIDGGVFFE 298
Query: 107 DG 102
DG
Sbjct: 299 DG 300
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 10.0
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Frame = -3
Query: 464 PYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAEN 285
P P+ +G G G + PG + ++ A + PQ P P GA
Sbjct: 185 PGPAGPKGAP--GAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGP-AGSPGAPG 241
Query: 284 RPLRNTTHDRKTMKG-PTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGSLGHFCA 108
P + K G P PG PG P QP + G CP Y G F
Sbjct: 242 GPGQAGAPGPKGPSGAPGQPGADGNPG---APGQPGQSGGAGEKGICPKYCAIDGGVFFE 298
Query: 107 DG 102
DG
Sbjct: 299 DG 300
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 157 GMECPSTSAGWLGPIWGPGRSYVPGTVGP 243
G E P+ +AG GP PG PG GP
Sbjct: 165 GPEGPNGTAGNKGPAGPPGPGGKPGPAGP 193
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -3
Query: 344 EEGAPQH---PVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
++GAP + P P P A N ++ T D P G PGP+ P QP
Sbjct: 105 QDGAPGNDGRPGAPGAPGPDAPNEHVQPTPADFCFECPPGPAGNAGNPGPKGPPGQP 161
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 26.6 bits (56), Expect = 10.0
Identities = 37/123 (30%), Positives = 41/123 (33%), Gaps = 1/123 (0%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P G S GE G P + PG D GAP P P P A+
Sbjct: 155 PPGPPGPPGDS--GEPGS-PGL--PGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQ 209
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYN-YGSLGHFC 111
+ PL P PG GPQ P P + P Q P G G
Sbjct: 210 SEPLI-----------PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPG 258
Query: 110 ADG 102
ADG
Sbjct: 259 ADG 261
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 26.6 bits (56), Expect = 10.0
Identities = 37/123 (30%), Positives = 41/123 (33%), Gaps = 1/123 (0%)
Frame = -3
Query: 467 PPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAE 288
PP P G S GE G P + PG D GAP P P P A+
Sbjct: 155 PPGPPGPPGDS--GEPGS-PGL--PGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQ 209
Query: 287 NRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYN-YGSLGHFC 111
+ PL P PG GPQ P P + P Q P G G
Sbjct: 210 SEPLI-----------PGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPG 258
Query: 110 ADG 102
ADG
Sbjct: 259 ADG 261
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 142 GGHWRGMECPSTSAGWLGPIWGPGRSYVPGTVG 240
GG G C S G GP PG+ PG G
Sbjct: 116 GGGGGGGSCCSCGIGAAGPAGAPGKDGAPGEDG 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,014,043
Number of Sequences: 27780
Number of extensions: 339969
Number of successful extensions: 1354
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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