Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0322
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 26 0.25
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 25 0.44
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 1.0
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 24 1.0
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 23 1.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 3.1
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 9.4
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 25.8 bits (54), Expect = 0.25
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 285 PTPAEHHARPENDEGSHRTRYIRPTWPPN 199
PT A+PE + G++R YI PP+
Sbjct: 28 PTRLRREAKPEAEPGNNRPVYIPQPRPPH 56
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 53 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 109 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 140
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 196
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 193 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 224
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 221 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 252
Score = 22.6 bits (46), Expect = 2.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A+PE G++R YI PP+
Sbjct: 249 RPPHPRLRREAKPEAKPGNNRPVYIPQPRPPH 280
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 25.0 bits (52), Expect = 0.44
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 285 PTPAEHHARPENDEGSHRTRYIRPTWPPN 199
PT A PE + G++R YI PP+
Sbjct: 29 PTRLRREAEPEAEPGNNRPVYIPQPRPPH 57
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 54 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 85
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 82 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 113
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 110 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 141
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 285 PTPAEHHARPENDEGSHRTRYIRPTWPPN 199
P A+PE + G++R YI PP+
Sbjct: 29 PARLRREAKPEAEPGNNRPIYIPQPRPPH 57
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A+PE + G++R YI PP+
Sbjct: 137 RPPHPRLRREAKPEAEPGNNRPVYIPQPRPPH 168
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 282 TPAEHHARPENDEGSHRTRYIRPTWPPN 199
T A+PE + G++R YI PP+
Sbjct: 1 TRLRREAKPEAEPGNNRPVYIPQPRPPH 28
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 25 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 56
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 53 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 81 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 112
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 109 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 140
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 291 REPTPA-EHHARPENDEGSHRTRYIRPTWPPN 199
R P P A PE + G++R YI PP+
Sbjct: 165 RPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH 196
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 23.0 bits (47), Expect = 1.8
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 158 AWSAPLPPPAGWVLFGGQVGRM-YRVRWD 241
A S LPP GW +G + G + V W+
Sbjct: 26 ALSLSLPPLFGWGSYGPEAGNVSCSVSWE 54
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 3.1
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 224 YRVRWDPSSFSG 259
Y+++WDP + G
Sbjct: 84 YKLKWDPKEYGG 95
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 225 TGYGGTLHRFPVVRGVP 275
TG+GG++ P R +P
Sbjct: 86 TGFGGSIITIPPTRKLP 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,127
Number of Sequences: 438
Number of extensions: 4816
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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