Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0322
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 36 0.015
At5g51800.1 68418.m06423 expressed protein 30 0.75
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 30 1.00
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 1.3
At4g23380.1 68417.m03371 hypothetical protein predicted proteins... 29 2.3
At2g35230.2 68415.m04322 VQ motif-containing protein contains PF... 29 2.3
At2g35230.1 68415.m04321 VQ motif-containing protein contains PF... 29 2.3
At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar ... 28 3.0
At4g31630.1 68417.m04493 transcriptional factor B3 family protei... 28 3.0
At4g19920.1 68417.m02918 disease resistance protein (TIR class),... 28 3.0
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 28 4.0
At1g20760.1 68414.m02600 calcium-binding EF hand family protein ... 28 4.0
At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containi... 27 5.3
At4g17090.1 68417.m02575 beta-amylase (CT-BMY) / 1,4-alpha-D-glu... 27 5.3
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 27 5.3
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 27 7.0
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 27 7.0
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 27 7.0
At4g23250.1 68417.m03352 protein kinase family protein contains ... 27 7.0
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 7.0
At1g64150.1 68414.m07267 expressed protein contains Pfam profile... 27 9.3
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 27 9.3
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 35.9 bits (79), Expect = 0.015
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = -3
Query: 332 PQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPL 153
PQ P+ P++ + P + + PT P YD PG + P+ S P
Sbjct: 359 PQQSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPSMYDGPGGRSNSGFPSGYSPESYPY 418
Query: 152 QCPPYNYGS 126
PP YG+
Sbjct: 419 TGPPSQYGN 427
>At5g51800.1 68418.m06423 expressed protein
Length = 972
Score = 30.3 bits (65), Expect = 0.75
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 315 TRYSTRGGREPTPAEHHARPENDEGSHRTR---YIRPTWPPN 199
T S+ G+E T +E +P+ + H+ R Y+ P W PN
Sbjct: 113 TAGSSPPGQEATNSEKQQQPKTESFQHKFRKGKYVSPVWKPN 154
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 29.9 bits (64), Expect = 1.00
Identities = 30/111 (27%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Frame = -3
Query: 470 QPPYPSDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQ-HPVVPDIPQEG 294
+PP P+ GH R +P GH R R +N G Q P P P
Sbjct: 49 RPPLPATTAGHHRQLRPPSIPVTTNTGH--RHCRPPSNPATTNSGHHQLRPPPPPPPPLS 106
Query: 293 AENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPP 141
A TT + P P P P I P GH + PP
Sbjct: 107 A-----ITTTGHHHHRRSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPP 152
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 302 QEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAE 177
Q G ++RP+ T+H ++ P +P + P P P+Q E
Sbjct: 1117 QLGQQHRPVFGTSHQHMSLSSPPLPSS-SPPPPPAPPSQQGE 1157
>At4g23380.1 68417.m03371 hypothetical protein predicted proteins,
Arabidopsis thaliana
Length = 400
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 278 LRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMP 156
LRN + K P P TYD G ++GP Q +++G S P
Sbjct: 79 LRNHSVKLKPTSVPKWPITYDNKGQKVGPMQ-LQLKGISCP 118
>At2g35230.2 68415.m04322 VQ motif-containing protein contains
PF05678: VQ motif
Length = 295
Score = 28.7 bits (61), Expect = 2.3
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = -3
Query: 437 SRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHD 258
S G++G + PGH+QR + G Q P +P G E RP
Sbjct: 53 SSLGDSGPNANQMQPGHEQRPYIPGHEQRPYVPGNEQQPYMP-----GNEQRPYIPGHEQ 107
Query: 257 RKTMKGPTVPGTYDRPGPQIGPNQ 186
R M P + +P PQ P Q
Sbjct: 108 RSYM--PAQSQSQSQPQPQPQPQQ 129
>At2g35230.1 68415.m04321 VQ motif-containing protein contains
PF05678: VQ motif
Length = 402
Score = 28.7 bits (61), Expect = 2.3
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = -3
Query: 437 SRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPLRNTTHD 258
S G++G + PGH+QR + G Q P +P G E RP
Sbjct: 160 SSLGDSGPNANQMQPGHEQRPYIPGHEQRPYVPGNEQQPYMP-----GNEQRPYIPGHEQ 214
Query: 257 RKTMKGPTVPGTYDRPGPQIGPNQ 186
R M P + +P PQ P Q
Sbjct: 215 RSYM--PAQSQSQSQPQPQPQPQQ 236
>At5g61610.1 68418.m07731 glycine-rich protein / oleosin similar to
variable surface lipoprotein Vsp422-3 (GI:15384285)
[Mycoplasma bovis]; similar to glycine-rich protein
atGRP-6, Arabidopsis thaliana, PIR:T49893
Length = 225
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 279 PAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGR 172
PAE H P+ D+ + + + PP + +PA G +
Sbjct: 166 PAEGHKPPQKDKPAEGDKPVEEDKPPQKDKPAEGDK 201
>At4g31630.1 68417.m04493 transcriptional factor B3 family protein
similar to reproductive meristem gene 1 from [Brassica
oleracea var. botrytis] GI:3170424, [Arabidopsis
thaliana] GI:13604227; contains Pfam profile PF02362: B3
DNA binding domain
Length = 512
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = -3
Query: 455 SDDEGHSRCGETGRLPKIIPPGHDQRVVRVTNNAEAREEGAPQHPVVPDIPQEGAENRPL 276
+ +GH R+ P +Q RV A+ EEG P D P + +P
Sbjct: 407 ASSDGHKTADRKPRMTDQAPLAEEQTDNRVEKRAQVTEEGGPSRSTRAD-PGNLQQKQPC 465
Query: 275 RNTTHDRK 252
+ H +K
Sbjct: 466 SISDHVKK 473
>At4g19920.1 68417.m02918 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 471 PASLSFRRRGPLPLWRDGQTP*NHPPGPRP 382
P L R R PLP R Q P + PP PRP
Sbjct: 21 PPVLLTRPRPPLPYARPLQPPQSLPPRPRP 50
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -1
Query: 298 RGPRTDPCGTPRTTGKR*RVPPYPVHTTDLAPK*DPTSRRR*RGTPCLSSAPP 140
R P P PRT + P P T P P S G+P SSA P
Sbjct: 30 RSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAAPVSPP--AGSPLPSSASP 80
>At1g20760.1 68414.m02600 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 1019
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 308 IPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
+ Q G RP+ TT R P VP +PG I PNQP
Sbjct: 470 VQQPGMGARPITPTTGMR-----PPVPAPGPQPGSGIPPNQP 506
>At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 893
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 201 LGARSVVCTGYGGTLHRFPVVRGVPQGSVL 290
LGA S + +G T+H +VRG+P VL
Sbjct: 232 LGASSFLGLEFGKTIHSNIIVRGIPLNVVL 261
>At4g17090.1 68417.m02575 beta-amylase (CT-BMY) / 1,4-alpha-D-glucan
maltohydrolase identical to beta-amylase enzyme
GI:6065749 from [Arabidopsis thaliana]
Length = 548
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 122 LSYHSYRGGTGEAWSAPLPPPAGWVL 199
+S+H G G++ S PLPP WVL
Sbjct: 164 MSFHQCGGNVGDSCSIPLPP---WVL 186
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -3
Query: 281 PLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHSMPLQCPPYNYGS 126
PL ++ + K P P Y P P + + +V+ S P PPY Y S
Sbjct: 17 PLYDSPTPKVDYKSPPPPYVYSSPPPPLSYSPSPKVDYKSPP---PPYVYSS 65
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -3
Query: 344 EEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
++ PQH P PQ + +P H P PG YD P P P
Sbjct: 71 QQQQPQHLPHPPHPQMFGQQQPQAFLPHLPPHHLPPPFPGPYDSAPPPPPPADP 124
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 288 EPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGALHAS 154
+P P HARP+ D+ +H R + P + G G L+ +
Sbjct: 241 QPHPFAPHARPDFDQSTHAFRGLSGPLPADVAMELNGVLGNLNGT 285
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -3
Query: 344 EEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
++ PQH P PQ + +P H P PG YD P P P
Sbjct: 71 QQQQPQHLPHPPHPQMFGQQQPQAFLPHLPPHHLPPPFPGPYDSAPPPPPPADP 124
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 288 EPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGALHAS 154
+P P HARP+ D+ +H R + P + G G L+ +
Sbjct: 241 QPHPFAPHARPDFDQSTHAFRGLSGPLPADVAMELNGVLGNLNGT 285
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = -3
Query: 344 EEGAPQHPVVPDIPQEGAENRPLRNTTHDRKTMKGPTVPGTYDRPGPQIGPNQP 183
++ PQH P PQ + +P H P PG YD P P P
Sbjct: 71 QQQQPQHLPHPPHPQMFGQQQPQAFLPHLPPHHLPPPFPGPYDSAPPPPPPADP 124
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 288 EPTPAEHHARPENDEGSHRTRYIRPTWPPNRTQPAGGGRGALHAS 154
+P P HARP+ D+ +H R + P + G G L+ +
Sbjct: 241 QPHPFAPHARPDFDQSTHAFRGLSGPLPADVAMELNGVLGNLNGT 285
>At4g23250.1 68417.m03352 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 998
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -3
Query: 302 QEGAENRPLRNTTH-----DRKTMKGPTVPGTYDRPGPQIGPNQPAEVEGHS 162
QE +RP +T H T+ P PG + R GP P+ V G S
Sbjct: 596 QENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRNGPGSNPSSQGMVPGQS 647
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 480 RRDPASLSFRRRGPLPLWRDGQTP 409
RR P+ + RRR P PL+R ++P
Sbjct: 379 RRSPSPPARRRRSPSPLYRRNRSP 402
>At1g64150.1 68414.m07267 expressed protein contains Pfam profile
PF01169: Uncharacterized protein family UPF0016
Length = 370
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 87 KSIYEAISAKVA*ATI-VIGGALERHGVPLYLRRLVGSYLG 206
KS + I+ A + + VI GAL HG L L GS LG
Sbjct: 301 KSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLG 341
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 122 LSYHSYRGGTGEAWSAPLPPPAGWVLFGGQVG 217
+ YHS+ G A++AP P P + QVG
Sbjct: 781 MDYHSFNRSAGPAYNAP-PGPGSYRSIHSQVG 811
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,483,171
Number of Sequences: 28952
Number of extensions: 316367
Number of successful extensions: 878
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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