Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0319
(690 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.8
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 3.1
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 5.4
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 7.2
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 21 9.5
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 9.5
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 9.5
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 9.5
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 427 NVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDE 606
N+ + +L E I P+G + +M S HH + E+ G +S D
Sbjct: 1136 NIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDS 1195
Query: 607 SGFAPNIQNNKDAL---YLIQDAIQKAG 681
+ QN +D L Y I+D + G
Sbjct: 1196 ETVSTVPQNKRDDLVNPYWIEDPDVRKG 1223
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 427 NVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDE 606
N+ + +L E I P+G + +M S HH + E+ G +S D
Sbjct: 1136 NIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDS 1195
Query: 607 SGFAPNIQNNKDAL---YLIQDAIQKAG 681
+ QN +D L Y I+D + G
Sbjct: 1196 ETVSTVPQNKRDDLVNPYWIEDPDVRKG 1223
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 427 NVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDE 606
N+ + +L E I P+G + +M S HH + E+ G +S D
Sbjct: 1136 NIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDS 1195
Query: 607 SGFAPNIQNNKDAL---YLIQDAIQKAG 681
+ QN +D L Y I+D + G
Sbjct: 1196 ETVSTVPQNKRDDLVNPYWIEDPDVRKG 1223
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 427 NVINGGSHAGNKLAMQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGDE 606
N+ + +L E I P+G + +M S HH + E+ G +S D
Sbjct: 1136 NIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDS 1195
Query: 607 SGFAPNIQNNKDAL---YLIQDAIQKAG 681
+ QN +D L Y I+D + G
Sbjct: 1196 ETVSTVPQNKRDDLVNPYWIEDPDVRKG 1223
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 127 LSVQELHEHQWRHQRVQLPGTSQALLPD 44
+S + H+HQ VQ+P A+ PD
Sbjct: 19 VSAEHPHQHQHYGAAVQVPQGGGAVQPD 46
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 5.4
Identities = 5/15 (33%), Positives = 10/15 (66%)
Frame = +3
Query: 414 CTSFQCDQWRITCWK 458
C + +C+ + TCW+
Sbjct: 873 CVTCKCENGKPTCWR 887
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 538 VYHHLKKIIKEKFGLDSTAVGDESGFAPNIQ 630
V++ I++E+F L + + E F+P I+
Sbjct: 49 VFYMYTLILEERFKLINLIIKQEEFFSPKIK 79
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 619 PNIQNNKDALYLI 657
PN +NN D YLI
Sbjct: 359 PNSENNLDNFYLI 371
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 619 PNIQNNKDALYLI 657
PN +NN D YLI
Sbjct: 361 PNSENNLDNFYLI 373
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 619 PNIQNNKDALYLI 657
PN +NN D YLI
Sbjct: 359 PNSENNLDNFYLI 371
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 619 PNIQNNKDALYLI 657
PN +NN D YLI
Sbjct: 361 PNSENNLDNFYLI 373
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.314 0.134 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,685
Number of Sequences: 336
Number of extensions: 3460
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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