Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0318
(732 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.27
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.27
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.48
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 25 0.48
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 1.5
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 23 3.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.9
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.9
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 7.8
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 7.8
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 7.8
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 7.8
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 594 RDTEASSDSFVNALFKCEKCVEAFPNKED 680
+D E + VN LFKC C NKE+
Sbjct: 1071 QDDEGGLEFSVNKLFKCMICTYKADNKEN 1099
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 594 RDTEASSDSFVNALFKCEKCVEAFPNKED 680
+D E + VN LFKC C NKE+
Sbjct: 1071 QDDEGGLEFSVNKLFKCMICTYKADNKEN 1099
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 636 FKCEKCVEAFPNKEDLNDHNLKKHNKL 716
F+C KC NK LN H +K H+ +
Sbjct: 259 FQCNKCDYTCVNKSMLNSH-MKSHSNV 284
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 25.4 bits (53), Expect = 0.48
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 636 FKCEKCVEAFPNKEDLNDHNLKKHNKL 716
F+C KC NK LN H +K H+ +
Sbjct: 17 FQCNKCDYTCVNKSMLNSH-MKSHSNV 42
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = -2
Query: 605 FCIPLGLYVTLSQLYLFVQMHQSLALRSFLYLLFWLHYCFC 483
+C+ + L Y F+ L L +Y +++H FC
Sbjct: 229 YCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 636 FKCEKCVEAFPNKEDLNDH 692
+ C+ C +AF ++ L DH
Sbjct: 108 YSCDICGKAFRRQDHLRDH 126
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 673 LLGNASTHFSHLNKAFTK 620
+ GNA THF H + K
Sbjct: 234 IAGNAGTHFWHAHTGLQK 251
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 673 LLGNASTHFSHLNKAFTK 620
+ GNA THF H + K
Sbjct: 234 IAGNAGTHFWHAHTGLQK 251
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 186 ECFHQILGDLQTVAD 230
+C H++LG + +AD
Sbjct: 357 DCIHELLGHMPLLAD 371
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +1
Query: 4 FHWHLVY 24
+HWHLVY
Sbjct: 208 WHWHLVY 214
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.4 bits (43), Expect = 7.8
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +1
Query: 4 FHWHLVY 24
+HWHLVY
Sbjct: 208 WHWHLVY 214
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 615 DSFVNALFKCEKCVEAFPNKEDLNDH 692
DS + F CE C +F K L +H
Sbjct: 128 DSSRDRPFTCEVCNRSFGYKHVLQNH 153
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,114
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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