Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0317
(612 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 27 0.48
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 0.83
DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein. 25 1.5
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 2.5
AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase... 25 2.5
AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase... 25 2.5
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 24 3.4
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 24 3.4
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 24 4.4
AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative odorant-b... 24 4.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 4.4
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 27.1 bits (57), Expect = 0.48
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
Frame = -3
Query: 418 LDGGVHFHQSIQEFPGHPCAQ*QEPRPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSED 239
+DGG++ S++ FPG+ + + + + ++F LH V N L ED
Sbjct: 167 VDGGLNIPHSVKRFPGYSAEN------KSFNAEMHRD--HIFGLH---VANYMRTLEEED 215
Query: 238 EHGCLS--GRPVSSGILACRCRQRHEVHSPSIHRLTD---QPLLRRPCAFRKRYEACARP 74
E + +S GI A ++ SI ++ P R P + R+ +C P
Sbjct: 216 EEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRS-GGRWPSCRSP 274
Query: 73 PLRTTS 56
P R S
Sbjct: 275 PARRRS 280
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.2 bits (55), Expect = 0.83
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -2
Query: 401 FPSVNPGISWAPLRTITRAKTERLASTIHPR 309
+P + G + APLR+I + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437
>DQ314781-1|ABC54566.1| 407|Anopheles gambiae OSKAR protein.
Length = 407
Score = 25.4 bits (53), Expect = 1.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 153 PFIA*LISLYFGAHALFVKDTKLVLVHHFEQLLASRCRVRNV 28
PFIA + + G L + L+H F QL+A R R RNV
Sbjct: 265 PFIADHVLVNVGTVDLLHGRAMIDLIHDFNQLVA-RFRERNV 305
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.6 bits (51), Expect = 2.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 343 RPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSEDEHGCLS 221
+P+D+R+ + L VF +GA+ ++ T ED G S
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATGGFS 896
>AF063021-3|AAC16247.1| 484|Anopheles gambiae dopa decarboxylase
isoform 2 protein.
Length = 484
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 133 QPLLRRPCAFRKRYEACAR 77
Q +RR CAF K++EA R
Sbjct: 379 QAHIRRHCAFAKQFEALCR 397
>AF063021-2|AAC16249.1| 515|Anopheles gambiae dopa decarboxylase
isoform 1 protein.
Length = 515
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 133 QPLLRRPCAFRKRYEACAR 77
Q +RR CAF K++EA R
Sbjct: 410 QAHIRRHCAFAKQFEALCR 428
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.2 bits (50), Expect = 3.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 181 RQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 47
+Q+ ++HS + + RRP + + P L TTSG P
Sbjct: 25 QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.2 bits (50), Expect = 3.4
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 181 RQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 47
+Q+ ++HS + + RRP + + P L TTSG P
Sbjct: 25 QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 23.8 bits (49), Expect = 4.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 348 SCYCAQGCPGN 380
+CYC CPGN
Sbjct: 73 TCYCEGHCPGN 83
>AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative
odorant-binding protein OBPjj2 protein.
Length = 228
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 209 FIGNPCLSLPPATRS 165
F GNPCL PP ++
Sbjct: 55 FAGNPCLKGPPVPKN 69
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 4.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 36 VPGNGMPEVVRSGGRAQA 89
VPG+G+P SGG A
Sbjct: 3225 VPGSGLPAAAASGGAPSA 3242
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,147
Number of Sequences: 2352
Number of extensions: 14974
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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