Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0316
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 371 e-103
03_01_0547 + 4093196-4093657,4094267-4095148 371 e-103
03_01_0544 + 4082528-4082989,4083585-4084466 371 e-103
03_01_0543 + 4076981-4077442,4078145-4079026 371 e-103
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 205 2e-53
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 205 2e-53
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 177 1e-44
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 159 2e-39
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 137 7e-33
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 100 1e-21
02_04_0462 + 23131433-23132836 98 6e-21
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 60 2e-09
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 53 2e-07
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 50 1e-06
02_04_0148 - 20198407-20201424 49 3e-06
03_05_0511 + 25056018-25059107 49 4e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 48 6e-06
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 45 7e-05
04_01_0103 + 1082077-1082167,1083037-1085477 43 3e-04
02_04_0017 + 18937774-18937864,18938505-18940945 43 3e-04
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 41 9e-04
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 40 0.002
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 39 0.004
01_06_0662 + 30987187-30987277,30987825-30990214 38 0.006
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 35 0.011
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 38 0.011
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 27 0.32
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 31 0.96
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 30 1.7
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.7
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 30 2.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.9
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 28 9.0
09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465 28 9.0
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 9.0
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 28 9.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 371 bits (913), Expect = e-103
Identities = 173/216 (80%), Positives = 191/216 (88%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 371 bits (913), Expect = e-103
Identities = 173/216 (80%), Positives = 191/216 (88%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 371 bits (913), Expect = e-103
Identities = 173/216 (80%), Positives = 191/216 (88%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 371 bits (913), Expect = e-103
Identities = 173/216 (80%), Positives = 191/216 (88%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 205 bits (501), Expect = 2e-53
Identities = 98/219 (44%), Positives = 149/219 (68%), Gaps = 8/219 (3%)
Frame = +2
Query: 98 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 277
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 278 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 457
ERERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEA
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 365
Query: 458 GISKN-----GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G+ GQT+EHA L + GV+QLIV VNKMD+ Y + R+E IK ++ S+++
Sbjct: 366 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFEFIKVQLGSFLRS 423
Query: 623 IGYNPATVAFVPISGWHGDNMLE-PSD--KMPWFKGWTI 730
+ ++V ++P+S N+++ PSD W++G+ +
Sbjct: 424 CNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCL 462
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 205 bits (501), Expect = 2e-53
Identities = 98/219 (44%), Positives = 149/219 (68%), Gaps = 8/219 (3%)
Frame = +2
Query: 98 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 277
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 278 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 457
ERERG+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEA
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 365
Query: 458 GISKN-----GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G+ GQT+EHA L + GV+QLIV VNKMD+ Y + R+E IK ++ S+++
Sbjct: 366 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFEFIKVQLGSFLRS 423
Query: 623 IGYNPATVAFVPISGWHGDNMLE-PSD--KMPWFKGWTI 730
+ ++V ++P+S N+++ PSD W++G+ +
Sbjct: 424 CNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCL 462
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 177 bits (430), Expect = 1e-44
Identities = 90/204 (44%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Frame = +2
Query: 131 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIA 310
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 311 LWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 478
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQ
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQ 123
Query: 479 TREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYN-PATVAFV 655
TREH LLA TLGV +LIV +NKMD + + RY+EI+ ++ +++ GYN V F+
Sbjct: 124 TREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFL 183
Query: 656 PISGWHGDNMLEPSDK--MPWFKG 721
PISG G NM DK W+ G
Sbjct: 184 PISGLLGSNMKTRMDKSICSWWDG 207
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 159 bits (386), Expect = 2e-39
Identities = 72/156 (46%), Positives = 108/156 (69%), Gaps = 2/156 (1%)
Frame = +2
Query: 227 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 406
+GKGSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 407 ADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEAR 580
+D A+L++ A G FEAG+ N GQT+EH+ L + GV LIV VNKMDS E Y + R
Sbjct: 336 SDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKER 393
Query: 581 YEEIKKEVSSYIKKIGYNPATVAFVPISGWHGDNML 688
+ IK ++ ++++ GY + VA+VPIS +N++
Sbjct: 394 FNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLM 429
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 137 bits (332), Expect = 7e-33
Identities = 68/148 (45%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Frame = +2
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
+G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 74
Query: 467 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYN-PAT 643
+ GQTREH LLA TLGV +L+V +NKMD + + + RY+EI+ ++ ++K GYN
Sbjct: 75 RGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKD 134
Query: 644 VAFVPISGWHGDNMLEPSDK--MPWFKG 721
V F+PISG G NM DK W+ G
Sbjct: 135 VHFLPISGLLGTNMKTRMDKSNCSWWSG 162
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 100 bits (239), Expect = 1e-21
Identities = 67/198 (33%), Positives = 97/198 (48%)
Frame = +2
Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 268
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 269 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 448
E+ RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGP 167
Query: 449 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIG 628
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPG 220
Query: 629 YNPATVAFVPISGWHGDN 682
+ +S G N
Sbjct: 221 DEIPIIRGSALSALQGTN 238
>02_04_0462 + 23131433-23132836
Length = 467
Score = 98.3 bits (234), Expect = 6e-21
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Frame = +2
Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 268
+ K H+NI IGHVD GK+T T L + +K+++ +D
Sbjct: 66 RTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE---------------IDA 110
Query: 269 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 448
ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 111 APEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 170
Query: 449 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYE-EIKKEVSSY 613
QT+EH LLA +GV +++V +NK D + E E+++ +SSY
Sbjct: 171 MP-------QTKEHILLAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSY 219
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 38 GLNGSHILRNLDPQXMGKEKTHI----NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 205
G++ + LR D + + + + + NI + H+DSGK+T T ++Y G I E
Sbjct: 43 GMSSASALRARDEKEVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRIH----EI 98
Query: 206 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 385
E ++ G G+ +D + ERE+GITI A + Y V IID PGH DF
Sbjct: 99 HEVRGRD-GVGA-----KMDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDFTIE 152
Query: 386 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 496
+ D A+L++ + G I+ + Q R + +
Sbjct: 153 VERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 53.2 bits (122), Expect = 2e-07
Identities = 46/174 (26%), Positives = 72/174 (41%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
RGITI + + + ++D PGH DF + + AVL+V AG G
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPL----- 161
Query: 467 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIG 628
QT+ A G++ +++ +NK+D P E E++ V +G
Sbjct: 162 --AQTKFVLSKALKYGLRPILL-LNKVD--RPSVSEETCNEVESLVFDLFANLG 210
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 50.4 bits (115), Expect = 1e-06
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 287 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 454
RGITI + + Y + +ID PGH DF + + + A+L+V A G E
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 181
Query: 455 AGISKNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPYHEARYEEI 592
A QT + LA + ++I +NK+D EP EEI
Sbjct: 182 A------QTLANVYLALENDL-EIIPVLNKIDLPGAEPDRVAQEIEEI 222
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 49.2 bits (112), Expect = 3e-06
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 287 RGITI---DIALWKF--ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
R IT+ IAL + + + V +ID+PGH DF + AD A+++V A G
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/113 (28%), Positives = 51/113 (45%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
R IT+ A + V +ID+PGH DF + + +D A+++V A G
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 48.4 bits (110), Expect = 6e-06
Identities = 35/110 (31%), Positives = 57/110 (51%)
Frame = +2
Query: 101 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 280
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 281 RERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ERGITI +K+ + IID PGH DF + D A++ +
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 44.8 bits (101), Expect = 7e-05
Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 287 RGITIDI---------------ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAV 421
RGIT+ A + + Y + +ID PGH DF + + A+
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGAL 162
Query: 422 LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 550
L+V A G QT + LAF + +I +NK+D
Sbjct: 163 LVVDAAQG-------VQAQTIANFYLAFESNL-SIIPVINKID 197
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 250
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 251 AWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ + E ++ + + + ++Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 250
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 251 AWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ + E ++ + + + ++Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGISLFYEMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 41.1 bits (92), Expect = 9e-04
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 250
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKS 72
Query: 251 AWVLDKLKAERERGITIDIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCA 418
+ L E D AL FE + Y + +ID+PGH DF + D A
Sbjct: 73 TGI--SLYYE-----MTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGA 125
Query: 419 VLIV 430
+++V
Sbjct: 126 LVVV 129
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Frame = +2
Query: 59 LRNLDPQXMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMG 232
L L P+ + ++ T INI IGHV GKST ++ G+ R + E+ ++G
Sbjct: 47 LHPLSPEVISRQAT-INIGTIGHVAHGKST----VVKAISGVQTVRFKNELERNITIKLG 101
Query: 233 KGSFKYAWVLDK-------LKAE---RERGITIDIALWKFETSKY--YVTIIDAPGHRDF 376
+ K D+ KA +E D+ ++ K +V+ +D PGH
Sbjct: 102 YANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFVDCPGHDIL 161
Query: 377 IKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 556
+ M+ G + D A+L++AA QT EH + ++ +I+ NK+D
Sbjct: 162 MATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRLQHIIILQNKIDLI 215
Query: 557 EPPYHEARYEEIKKEVSSYI 616
+ ++E I+K + I
Sbjct: 216 QEGAAMNQHEAIQKFIQGTI 235
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/113 (24%), Positives = 49/113 (43%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N+ ++GH+ GK+ L+ + +D F+ E + + F V ++ +
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGERHVR--FTDTRVDEQERRVSI 202
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
+ + + + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 203 KAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 250
M K+ N+ V+ HVD GKST T L+ G I + + + + E +G + K
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKS 72
Query: 251 AWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ + E ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGISLYYEMSDE---SLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 35.1 bits (77), Expect(2) = 0.011
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 230 GKGSFKYAWVLDKLKAERERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQ 406
GK S + + A+ GIT I + E S +T +D PGH F G +
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 407 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 556
D VL+VAA G + + HA A ++V VNK D +
Sbjct: 269 TDIVVLVVAADDGVMPQTL----EAMSHAKAANV----PIVVAVNKCDKS 310
Score = 21.4 bits (43), Expect(2) = 0.011
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2
Query: 110 IVVIGHVDSGKST 148
+ ++GHVD GK++
Sbjct: 200 VTIMGHVDHGKTS 212
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.5 bits (83), Expect = 0.011
Identities = 40/148 (27%), Positives = 61/148 (41%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI ++ HVD GK+T ++ + + + + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
RGITI + IID PGH DF + + + +L+V + G
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEGPMP---- 221
Query: 467 KNGQTREHALLAFTLGVKQLIVGVNKMD 550
QTR A G ++V VNK+D
Sbjct: 222 ---QTRFVLKKALEFG-HAVVVVVNKID 245
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 27.1 bits (57), Expect(2) = 0.32
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +2
Query: 266 KLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 433
K+ A GIT I ++ + + + +D PGH F G D +++V+
Sbjct: 451 KVVASEAGGITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVS 510
Query: 434 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 547
A G QT E A GV +++ +NK+
Sbjct: 511 ADDG-------VRPQTNEAIAHAKAAGV-PIVIAINKV 540
Score = 24.2 bits (50), Expect(2) = 0.32
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 68 LDPQXMGKEKTHINIVVI-GHVDSGKSTTTGHL 163
LD + + K + IV I GHVD GK+T ++
Sbjct: 415 LDEEDLDKLEDRPPIVTIMGHVDHGKTTLLDYI 447
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 545 MDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATV------AFVPISGWHGDNMLEPSDK 703
M STEP + Y + EV IKK+GYN + A+ G+H N PS +
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 726 VHPLNQGILSEGSSILSPCQPDIGTNATVAG 634
VHP +L G + L+ C P + ATVAG
Sbjct: 257 VHPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 526
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 527 IVGVNKMD 550
+V +NK+D
Sbjct: 560 VV-LNKVD 566
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 481 SLSILTDTGFELASSGCHDQYCAISLGSTRDHVLNEISMTGSINNG 344
SLS+ D+G SSG YC S GS+ + +++ S T S+ G
Sbjct: 264 SLSLTLDSGLSCRSSGGAGAYCC-SEGSSSNWLISSPSSTTSLVAG 308
>09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465
Length = 1058
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 700 IRRLQHIVTVPARYRYERHSSGIVTNFLNVRR 605
I LQ I ++P+ E H+SG + LN+RR
Sbjct: 870 IDTLQEIASLPSLKELEVHNSGRLQTVLNIRR 901
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 95 KTHINIVVIGHVDSG 139
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 515 VKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSY---IKKIGYNPATVAFVPISGWHGDNM 685
+K +++G NK+D E Y++ + +SSY KK+ Y A + S W+ D+
Sbjct: 272 IKHILLGRNKVDLGPWILQEINYQKEEGSLSSYEWFRKKLEYELNEEATLEKSEWNSDDD 331
Query: 686 LEPSDK 703
P ++
Sbjct: 332 NAPCNE 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,270,668
Number of Sequences: 37544
Number of extensions: 463417
Number of successful extensions: 1406
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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