Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0316
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 368 e-102
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 368 e-102
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 368 e-102
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 368 e-102
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 199 1e-51
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 197 7e-51
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 101 7e-22
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 98 5e-21
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 2e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 2e-08
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 4e-07
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 5e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 50 2e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 45 6e-05
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 45 6e-05
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 45 6e-05
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 44 8e-05
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 44 1e-04
At5g13650.2 68418.m01585 elongation factor family protein contai... 41 7e-04
At5g13650.1 68418.m01584 elongation factor family protein contai... 41 7e-04
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.003
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.016
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.016
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.086
At4g16120.1 68417.m02443 phytochelatin synthetase-related contai... 33 0.26
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.26
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 31 1.1
At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / sta... 30 1.4
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.4
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g50600.1 68414.m05683 scarecrow-like transcription factor 5 (... 30 1.9
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 29 4.3
At5g03650.1 68418.m00324 1,4-alpha-glucan branching enzyme / sta... 29 4.3
At4g18650.1 68417.m02760 transcription factor-related contains w... 28 5.7
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 28 5.7
At1g21910.1 68414.m02742 AP2 domain-containing transcription fac... 28 5.7
At4g29440.1 68417.m04203 expressed protein contains Pfam profil... 28 7.5
At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger) fa... 28 7.5
At1g70060.1 68414.m08061 paired amphipathic helix repeat-contain... 28 7.5
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 368 bits (905), Expect = e-102
Identities = 172/216 (79%), Positives = 190/216 (87%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 368 bits (905), Expect = e-102
Identities = 172/216 (79%), Positives = 190/216 (87%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 368 bits (905), Expect = e-102
Identities = 172/216 (79%), Positives = 190/216 (87%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 368 bits (905), Expect = e-102
Identities = 172/216 (79%), Positives = 190/216 (87%)
Frame = +2
Query: 83 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 262
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 263 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 442
DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 443 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 622
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180
Query: 623 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTI 730
+GYNP + FVPISG+ GDNM+E S + W+KG T+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL 216
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 199 bits (486), Expect = 1e-51
Identities = 96/213 (45%), Positives = 141/213 (66%), Gaps = 3/213 (1%)
Frame = +2
Query: 92 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 271
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 272 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 451
+ ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 452 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGY 631
E G + GQTREH LA TLGV +LIV VNKMD + + RY+EI++++ ++K GY
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277
Query: 632 N-PATVAFVPISGWHGDNMLE--PSDKMPWFKG 721
N V F+PISG G NM + + PW+ G
Sbjct: 278 NTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 197 bits (480), Expect = 7e-51
Identities = 90/212 (42%), Positives = 142/212 (66%), Gaps = 4/212 (1%)
Frame = +2
Query: 98 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 277
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 278 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 457
ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 458 GISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYN 634
G GQTREHA + GV+Q+IV +NKMD Y + R++ IK+ V S+++ +
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFK 415
Query: 635 PATVAFVPISGWHGDNML-EPSDK--MPWFKG 721
+++ ++P+S N++ PSD W++G
Sbjct: 416 DSSLTWIPLSAMENQNLVAAPSDNRLSSWYQG 447
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 101 bits (241), Expect = 7e-22
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Frame = +2
Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 268
++K H+NI IGHVD GK+T T L I +K+++ +D
Sbjct: 75 RKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDA 119
Query: 269 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 448
ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 120 APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 179
Query: 449 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYE-EIKKEVSSY 613
QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 180 MP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 98.3 bits (234), Expect = 5e-21
Identities = 66/198 (33%), Positives = 97/198 (48%)
Frame = +2
Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 268
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 269 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 448
E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 449 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIG 628
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG 220
Query: 629 YNPATVAFVPISGWHGDN 682
+ + +S G N
Sbjct: 221 DDIPIIRGSALSALQGTN 238
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 467 KNGQTREH 490
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 467 KNGQTREH 490
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/117 (30%), Positives = 56/117 (47%)
Frame = +2
Query: 95 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 274
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 275 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
E+ERGITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 287 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
RGITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 44.8 bits (101), Expect = 6e-05
Identities = 49/157 (31%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N +I H+D GKST L+ G I K G G +Y LDKL +RE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRE 109
Query: 287 RGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 439
RGIT+ E S Y + +ID PGH DF + S A+L+V A
Sbjct: 110 RGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAA 169
Query: 440 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 550
G QT + LAF + ++ +NK+D
Sbjct: 170 QG-------VQAQTVANFYLAFEANL-TIVPVINKID 198
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 44.8 bits (101), Expect = 6e-05
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Frame = +2
Query: 59 LRNLDPQXMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMG 232
L L P+ + ++ T INI IGHV GKST ++ G+ R + E+ ++G
Sbjct: 26 LHPLFPEVISRQAT-INIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLG 80
Query: 233 KGSFK-YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDF 376
+ K Y DK + +E T D+ ++ T + +V+ +D PGH
Sbjct: 81 YANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDIL 140
Query: 377 IKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 556
+ M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 141 MATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLI 194
Query: 557 EPPYHEARYEEIKKEVSS 610
++E I+K +++
Sbjct: 195 NEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 44.8 bits (101), Expect = 6e-05
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Frame = +2
Query: 59 LRNLDPQXMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMG 232
L L P+ + ++ T INI IGHV GKST ++ G+ R + E+ ++G
Sbjct: 26 LHPLFPEVISRQAT-INIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLG 80
Query: 233 KGSFK-YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDF 376
+ K Y DK + +E T D+ ++ T + +V+ +D PGH
Sbjct: 81 YANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDIL 140
Query: 377 IKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDST 556
+ M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 141 MATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLI 194
Query: 557 EPPYHEARYEEIKKEVSS 610
++E I+K +++
Sbjct: 195 NEKAATEQHEAIQKFITN 212
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 44.4 bits (100), Expect = 8e-05
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Frame = +2
Query: 56 ILRNLDPQXMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EM 229
+L L P+ + ++ T INI IGHV GKST ++ G+ R + E+ ++
Sbjct: 19 VLHPLSPEVISRQAT-INIGTIGHVAHGKST----VVKAISGVQTVRFKNELERNITIKL 73
Query: 230 GKGSFKYAWVLDKLKAERE---------RGITIDIALWKFETSKY----YVTIIDAPGHR 370
G + K D+ K R + T + + FE SK +V+ +D PGH
Sbjct: 74 GYANAKIYKCEDE-KCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLLRHVSFVDCPGHD 132
Query: 371 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 550
+ M+ G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 133 ILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHIIILQNKID 186
Query: 551 STEPPYHEARYEEIKKEVSSYI 616
+ ++E I+K + + +
Sbjct: 187 LIQENVAINQHEAIQKFIMNTV 208
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 44.0 bits (99), Expect = 1e-04
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 59 LRNLDPQXMGKEKTHINIVVIGHVDSGKST----TTG-HLIYKCGGIDKR-TIEKFEKEA 220
L L P+ + ++ T INI IGHV GKST +G H + +++ TI+ A
Sbjct: 20 LHPLSPEVISRQAT-INIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANA 78
Query: 221 QEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY--YVTIIDAPGHRDFIKNMIT 394
+ + +E + D++ + K +V+ +D PGH + M+
Sbjct: 79 KIYKCEKCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLN 138
Query: 395 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHE 574
G + D A+LI+AA QT EH + +K +I+ NK+D +
Sbjct: 139 GAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDIIIIQNKIDLIQENEAI 192
Query: 575 ARYEEIKKEVSS 610
++E+I++ +++
Sbjct: 193 KQHEDIQRFITN 204
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 41.1 bits (92), Expect = 7e-04
Identities = 43/148 (29%), Positives = 62/148 (41%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185
Query: 467 KNGQTREHALLAFTLGVKQLIVGVNKMD 550
QTR A G ++V VNK+D
Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKID 209
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 41.1 bits (92), Expect = 7e-04
Identities = 43/148 (29%), Positives = 62/148 (41%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 287 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 466
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184
Query: 467 KNGQTREHALLAFTLGVKQLIVGVNKMD 550
QTR A G ++V VNK+D
Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKID 208
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 274
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 275 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 430
E ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 287 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +2
Query: 107 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 286
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 287 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 445
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 34.3 bits (75), Expect = 0.086
Identities = 28/102 (27%), Positives = 44/102 (43%)
Frame = +2
Query: 341 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 520
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 521 QLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATV 646
++V +NK D + +Y+ + + ++ IG N V
Sbjct: 322 PVVVAINKCDKPGANPEKVKYQLTSEGIE--LEDIGGNVQAV 361
>At4g16120.1 68417.m02443 phytochelatin synthetase-related contains
Pfam PF04833: Phytochelatin synthetase-like conserved
region; supporting cDNA gi|26449620|dbj|AK117261.1|
Length = 661
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 552 ESILFTPTISCFTPRVKASRACSRVCPFLLIPASNSPVPAATISTAQSAW 403
+SI+ T +C KA+RACS P LL+P VP + AW
Sbjct: 431 DSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAW 480
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 350 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 526
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 527 IVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYN 634
+ +DS E +E+++E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.7 bits (66), Expect = 1.1
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 8/148 (5%)
Frame = +2
Query: 266 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 433
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 434 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSY 613
A G QT E A+ +++ +NK+D A + + +E+SS
Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKIDK-----EGASPDRVMQELSS- 630
Query: 614 IKKIGYNP----ATVAFVPISGWHGDNM 685
IG P V V IS G+N+
Sbjct: 631 ---IGLMPEDWGGDVPMVQISALKGENV 655
>At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / starch
branching enzyme class II (SBE2-1) nearly identical to
starch branching enzyme class II [Arabidopsis thaliana]
GI:619939
Length = 858
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 545 MDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATV------AFVPISGWHGDNMLEPSDK 703
M STEP + Y + +V IKK+GYN + A+ G+H N PS +
Sbjct: 335 MSSTEPKINT--YANFRDDVLPRIKKLGYNAVQIMAIQEHAYYASFGYHVTNFFAPSSR 391
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 526
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 527 IVGVNKMD 550
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 341 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 520
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 521 QLIVGVNKMD 550
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 347 IIDAPGHRDFIKNMITGTSQADCAVLIV 430
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g50600.1 68414.m05683 scarecrow-like transcription factor 5
(SCL5) similar to SCARECROW GB:AAB06318 GI:1497987 from
[Arabidopsis thaliana]
Length = 597
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +3
Query: 147 LLPAISSTSAAALINVQSRSLRKKLKRWARAPSSMLGYWTS*RRNANAVSPLT*LSGSLK 326
++P + S A+ +IN QS SL + + A S +++ +R + SP+ + +
Sbjct: 7 IIPLVESRQASGIINKQSTSLLIRFSLYLEASISTKSFFSKSQRISQTQSPICLSANYYQ 66
Query: 327 PAN 335
P N
Sbjct: 67 PDN 69
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 506 TLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFVPISGWHGDNM 685
T GV++ G+ + +S PP R E++ E S++ Y+P V F S +G +
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVF---SRANGSTI 70
Query: 686 LEPSDK 703
+P K
Sbjct: 71 WDPEGK 76
>At5g03650.1 68418.m00324 1,4-alpha-glucan branching enzyme / starch
branching enzyme class II (SBE2-2) identical to starch
branching enzyme class II [Arabidopsis thaliana]
GI:726490
Length = 716
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 545 MDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATV------AFVPISGWHGDNMLEPSDK 703
M STEP + Y + +V IKK+GYN + ++ G+H N PS +
Sbjct: 211 MSSTEPMVNT--YANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSR 267
>At4g18650.1 68417.m02760 transcription factor-related contains weak
similarity to TGACG-sequence specific DNA-binding
protein TGA-2.1 (TGA2.1) (Swiss-Prot:O24160) [Nicotiana
tabacum]
Length = 232
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/57 (19%), Positives = 29/57 (50%)
Frame = +2
Query: 536 VNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFVPISGWHGDNMLEPSDKM 706
++K+ + Y+ A++ I+++V ++ + NP A ++GW + D++
Sbjct: 48 ISKLTTHHKAYYTAKWAAIREDVLAFFGSVWLNPLENACSWLTGWKPSMVFRMVDRL 104
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 581 YEEIKKEVSSYIKKIGYNPATVAFVPISGWHGDNM 685
Y IKK++ ++ +I Y + + + GW G ++
Sbjct: 177 YTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSL 211
>At1g21910.1 68414.m02742 AP2 domain-containing transcription factor
family protein similar to TINY GB:CAA64359 GI:1246403
from [Arabidopsis thaliana]
Length = 230
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 90 KRRLISTSSSSAMWTLESPLLPAISSTSAAALINVQSRSLRKKLKRWARAPSSMLGYWTS 269
+ R I TSS+ L S + SS+S+++ + ++++ + K+K++ G W S
Sbjct: 4 QERKIQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVS 63
Query: 270 *RRNAN 287
R N
Sbjct: 64 EIRAPN 69
>At4g29440.1 68417.m04203 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 1090
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 445 RVRSRYQ*EWTDSRTRPACFHS 510
RV RYQ + T+SRTRP HS
Sbjct: 770 RVSFRYQEKRTESRTRPTHLHS 791
>At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 527 IVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNP 637
I N+ D T PP A + +KK+V + K+ Y+P
Sbjct: 57 IASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSP 93
>At1g70060.1 68414.m08061 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1362
Score = 27.9 bits (59), Expect = 7.5
Identities = 30/113 (26%), Positives = 48/113 (42%)
Frame = +2
Query: 257 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 436
+L +LK ++E + A + E +K + I HR + + Q D L A
Sbjct: 605 ILTRLKQKQE-----EWARCRTEFNKVWADIYTKNYHRS-LDHRSFYFKQQDSKNLSTKA 658
Query: 437 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIK 595
E + IS+ + + ALLA G ++ I D +P HE Y+ IK
Sbjct: 659 LLAEIKE-ISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHEDLYQLIK 710
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 452 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSS 610
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,703,397
Number of Sequences: 28952
Number of extensions: 357207
Number of successful extensions: 1223
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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