Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0307
(364 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B52EE Cluster: PREDICTED: similar to symplekin;... 78 4e-14
UniRef50_Q92797 Cluster: Symplekin; n=89; Eukaryota|Rep: Symplek... 72 3e-12
UniRef50_UPI0000D57873 Cluster: PREDICTED: similar to Symplekin;... 71 5e-12
UniRef50_Q17I55 Cluster: Symplekin; n=2; Culicidae|Rep: Sympleki... 66 2e-10
UniRef50_UPI0000E4656B Cluster: PREDICTED: similar to Symplekin;... 63 1e-09
UniRef50_Q8MSU4 Cluster: LD45768p; n=2; Sophophora|Rep: LD45768p... 56 3e-07
UniRef50_O16929 Cluster: Putative uncharacterized protein F25G6.... 45 5e-04
UniRef50_Q67W60 Cluster: Plant disease resistance polyprotein-li... 38 0.041
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 38 0.072
UniRef50_Q175B0 Cluster: Putative uncharacterized protein; n=2; ... 34 0.67
UniRef50_UPI0001553028 Cluster: PREDICTED: polymerase (RNA) II (... 33 1.2
UniRef50_UPI00005A96C2 Cluster: PREDICTED: hypothetical protein ... 33 1.2
UniRef50_A3XAE2 Cluster: LysM domain protein; n=1; Roseobacter s... 33 1.6
UniRef50_Q3JRQ4 Cluster: Putative uncharacterized protein; n=1; ... 31 4.8
UniRef50_UPI000045BA1E Cluster: COG0674: Pyruvate:ferredoxin oxi... 31 6.3
UniRef50_Q4SCZ9 Cluster: Chromosome 14 SCAF14646, whole genome s... 31 6.3
UniRef50_Q3W5S7 Cluster: Similar to Glycosyltransferase; n=1; Fr... 31 6.3
UniRef50_A5AP94 Cluster: Putative uncharacterized protein; n=1; ... 31 6.3
UniRef50_Q3JWW0 Cluster: Putative uncharacterized protein; n=3; ... 31 8.3
UniRef50_Q3JJ67 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_Q5Z473 Cluster: Pr1-like protein; n=8; Oryza sativa (ja... 31 8.3
UniRef50_A7QWR3 Cluster: Chromosome chr16 scaffold_207, whole ge... 31 8.3
UniRef50_Q61CX5 Cluster: Putative uncharacterized protein CBG127... 31 8.3
>UniRef50_UPI00015B52EE Cluster: PREDICTED: similar to symplekin; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to symplekin
- Nasonia vitripennis
Length = 1112
Score = 78.2 bits (184), Expect = 4e-14
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Frame = +1
Query: 1 EVIEKHALLYLGFISLNHPPP-----ELSSTRTRIMWNENLHKLCLNLVVALFPEKEGLL 165
++IE++A LYLGF+ L +PP + ++ W E+ + CL+L +AL E + L+
Sbjct: 718 KMIEEYAGLYLGFLRLPNPPEIVFGQDRGRSQLEENWTESTTRACLSLYLALLTENQSLV 777
Query: 166 MEIARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRG 345
E+AR+Y S AE KR+VLR IE P++++ + P EL+E CP+G
Sbjct: 778 HELARVYTSMSAEVKRIVLRLIETPVKSLGMES--------------PQLLELVEKCPKG 823
Query: 346 AETLL 360
AE L+
Sbjct: 824 AEMLI 828
>UniRef50_Q92797 Cluster: Symplekin; n=89; Eukaryota|Rep: Symplekin -
Homo sapiens (Human)
Length = 1274
Score = 72.1 bits (169), Expect = 3e-12
Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +1
Query: 1 EVIEKHALLYLGFISLNHPPPEL----SSTRTRIMWNENLHKLCLNLVVALFPEKEGLLM 168
E +EK AL YL + +PP L T W E K CL L +AL P+ L+
Sbjct: 747 EYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIH 806
Query: 169 EIARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGA 348
E+A +Y + A+ KR VLR IE PIR M P L+ENCP+GA
Sbjct: 807 ELAAVYTEAIADIKRTVLRVIEQPIRGMGMNS--------------PELLLLVENCPKGA 852
Query: 349 ETLLT 363
ETL+T
Sbjct: 853 ETLVT 857
>UniRef50_UPI0000D57873 Cluster: PREDICTED: similar to Symplekin; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to Symplekin
- Tribolium castaneum
Length = 1060
Score = 71.3 bits (167), Expect = 5e-12
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Frame = +1
Query: 4 VIEKHALLYLGFISLNHPPPELSS-TRTRIM---WNENLHKLCLNLVVALFPEKEGLLME 171
VIE+ A + L F+ L PP L ++ R+ W ++ K CL ++L P E L+ +
Sbjct: 676 VIEEFARMNLEFLKLQRPPESLCGFSQGRLKSETWGDDFIKACLIPYISLLPANESLIHD 735
Query: 172 IARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGAE 351
+A++Y +GA KR++LR +E PIR+M D P+ +L+E CP+G+E
Sbjct: 736 LAKVYVQTGANIKRIILRLLETPIRSM-GMDSPE-------------LLKLVEECPKGSE 781
Query: 352 TLLT 363
TL+T
Sbjct: 782 TLVT 785
>UniRef50_Q17I55 Cluster: Symplekin; n=2; Culicidae|Rep: Symplekin -
Aedes aegypti (Yellowfever mosquito)
Length = 1136
Score = 65.7 bits (153), Expect = 2e-10
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Frame = +1
Query: 7 IEKHALLYLGFISLNHPPPE-----LSSTRTRIMWNENLHKLCLNLVVALFPEKEGLLME 171
+EK AL +LG++ L +PP E L MW + L K CL L + + + ++
Sbjct: 736 MEKRALQWLGYLELENPPEEVFAFELGRAELPRMWTDELAKTCLGLFLEILVYNQEMIHR 795
Query: 172 IARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGAE 351
++ +Y + ++ KR +LR IE P+R + + E + L+ L+ENCP+G+E
Sbjct: 796 LSDVYTKATSDMKRAMLRAIEAPVRKIGA---------ESEELLK-----LIENCPKGSE 841
Query: 352 TLLT 363
T++T
Sbjct: 842 TIIT 845
>UniRef50_UPI0000E4656B Cluster: PREDICTED: similar to Symplekin; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Symplekin - Strongylocentrotus purpuratus
Length = 1245
Score = 63.3 bits (147), Expect = 1e-09
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Frame = +1
Query: 4 VIEKHALLYLGFISLNHPPP---------ELSSTRTRIMWNENLHKLCLNLVVALFPEKE 156
+IE+ A +L + LN PP E+ +T + W E K+CL L +AL P
Sbjct: 705 LIEEFATSFLRKLLLNRPPATLVLRLADQEMQATAAKA-WTEETAKMCLYLYLALLPINH 763
Query: 157 GLLMEIARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENC 336
L+ E+A +Y + A+ KR VLR +E P+R + + P L+E C
Sbjct: 764 KLIHELANVYVEATADIKRTVLRVLETPVRGV--------------GMVSPELLLLVETC 809
Query: 337 PRGAETLLT 363
P+GAETL+T
Sbjct: 810 PKGAETLVT 818
>UniRef50_Q8MSU4 Cluster: LD45768p; n=2; Sophophora|Rep: LD45768p -
Drosophila melanogaster (Fruit fly)
Length = 1165
Score = 55.6 bits (128), Expect = 3e-07
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +1
Query: 7 IEKHALLYLGFISLNHPPPELSST-----RTRIMWNENLHKLCLNLVVALFPEK-EGLLM 168
I++ AL +L FI PP + S W E+ K+C L L P K E L
Sbjct: 746 IDEFALEWLKFIEQESPPAAVFSQDFGRPTEEPDWREDTTKVCFGLAFTLLPYKPEVYLQ 805
Query: 169 EIARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGA 348
+I +++ S+ AE KR +LR+++ PI+ M + P +L+E+CP+G
Sbjct: 806 QICQVFVSTSAELKRTILRSLDIPIKKMGVES--------------PTLLQLIEDCPKGM 851
Query: 349 ETLL 360
ETL+
Sbjct: 852 ETLV 855
>UniRef50_O16929 Cluster: Putative uncharacterized protein F25G6.2;
n=2; Caenorhabditis|Rep: Putative uncharacterized protein
F25G6.2 - Caenorhabditis elegans
Length = 1143
Score = 44.8 bits (101), Expect = 5e-04
Identities = 31/102 (30%), Positives = 50/102 (49%)
Frame = +1
Query: 55 PPPELSSTRTRIMWNENLHKLCLNLVVALFPEKEGLLMEIARIYGSSGAEAKRVVLRTIE 234
PP + S+ W + ++K L + L P LL+ +A +Y S KRVVLR++E
Sbjct: 773 PPMYMRSSEDSDQWTDEMYKNSLAVYSTLMPSDPLLLIPLASVYAQSTNVFKRVVLRSLE 832
Query: 235 GPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGAETLL 360
P+ +S+++ L+E+CP GAETL+
Sbjct: 833 -PVFRQLSQEM---------------VISLIEDCPYGAETLV 858
>UniRef50_Q67W60 Cluster: Plant disease resistance polyprotein-like;
n=4; Oryza sativa (japonica cultivar-group)|Rep: Plant
disease resistance polyprotein-like - Oryza sativa
subsp. japonica (Rice)
Length = 379
Score = 38.3 bits (85), Expect = 0.041
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +3
Query: 135 GALPRKRRTTDGNSKDIRQLRGRSEARCTEN----HRGSDPSDGVQGPARQRV*RGRRHA 302
G P T D ++ R+L R E + HRGSD + G R+R GRR
Sbjct: 63 GKRPPTAATGDAAARRRRRLGARRERKGKNGGGVPHRGSDGAGGGDDERRRRATGGRRRT 122
Query: 303 APRLQGTARE--LSPRGRDSAH 362
A L+ T RE RGR+ H
Sbjct: 123 AAELRDTLREEKREVRGREGVH 144
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 37.5 bits (83), Expect = 0.072
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 PRKRRTTDGNSKDIRQLRGRSEARCTENHR-GSDPSDGVQGPARQRV*RGRRHAAPRLQG 320
PR+RR DG + RQ GR HR G+ G P QRV RGR A R +G
Sbjct: 1669 PRRRRECDGRGGERRQRLGRRGRGDLGEHRDGAGAGAGRGDPGGQRVGRGRHGRAGRRRG 1728
Query: 321 TARELSPR 344
AR L R
Sbjct: 1729 -ARLLGRR 1735
>UniRef50_Q175B0 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 334
Score = 34.3 bits (75), Expect = 0.67
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +3
Query: 180 DIRQLRGRSEARCTENHRGSDPSDGVQGPARQRV*RGRRHAAPRLQGTARELSPRGR 350
D+RQ R RSE R + RGS+ +G +G Q+ RGR+ QG +E GR
Sbjct: 134 DVRQDRVRSEGRRQNSGRGSNERNGSRGRVEQQRSRGRQEGR---QGGRQENRQEGR 187
>UniRef50_UPI0001553028 Cluster: PREDICTED: polymerase (RNA) II (DNA
directed) polypeptide L; n=1; Mus musculus|Rep:
PREDICTED: polymerase (RNA) II (DNA directed)
polypeptide L - Mus musculus
Length = 390
Score = 33.5 bits (73), Expect = 1.2
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +3
Query: 216 CTENHRGSDPSDGVQGPARQRV*RGRRHAAPRLQGTARELSPR 344
CTE RG PS G+ P R+R GRR P+LQG +PR
Sbjct: 176 CTE--RGRPPS-GLGTPYRRRFCSGRREGRPKLQGPDSAWAPR 215
>UniRef50_UPI00005A96C2 Cluster: PREDICTED: hypothetical protein
XP_852642; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_852642 - Canis familiaris
Length = 324
Score = 33.5 bits (73), Expect = 1.2
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 192 LRGRSEARCTENHRGSDPSDGVQGPAR---QRV*RGRRHAAPRLQGTARELSPRG 347
LR R +HR + P ++GPAR +R GRR APRL R RG
Sbjct: 104 LRPRPARPGPSDHREARPPRSLEGPARASARRAHAGRRGTAPRLSPEERSADARG 158
>UniRef50_A3XAE2 Cluster: LysM domain protein; n=1; Roseobacter sp.
MED193|Rep: LysM domain protein - Roseobacter sp. MED193
Length = 689
Score = 33.1 bits (72), Expect = 1.6
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 145 PEKEGLLMEIARIYGSSG-AEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRE 321
P KE L E A+ G + AE + ++ P A + PDN E +PA +
Sbjct: 164 PAKETALTETAQAEGETAEAETETATASVVQEPAEADATGGSPDNRAAETGNPAQPAAAQ 223
Query: 322 LLENCPRGAET 354
+ E+ G+ T
Sbjct: 224 IAEDAEAGSPT 234
>UniRef50_Q3JRQ4 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 534
Score = 31.5 bits (68), Expect = 4.8
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +3
Query: 114 ALLEFSCGALPRKRRTTDGNSKDIRQLRGRSEARCTENHRGSDPSDGVQGPARQRV*RGR 293
A +CG P R D + R E R R DP +G + + R
Sbjct: 12 AAARVACGRCPLGRHARDDRRRGARARAVDDEHRYGRRDRHRDPGEGARERGLRARAHHR 71
Query: 294 RHA-APRLQ-GTARELSPRGRDSA 359
HA R + G +R P GRD A
Sbjct: 72 EHAGGGRCRAGDSRAARPNGRDGA 95
>UniRef50_UPI000045BA1E Cluster: COG0674: Pyruvate:ferredoxin
oxidoreductase and related 2-oxoacid:ferredoxin
oxidoreductases, alpha subunit; n=1; Nostoc punctiforme
PCC 73102|Rep: COG0674: Pyruvate:ferredoxin
oxidoreductase and related 2-oxoacid:ferredoxin
oxidoreductases, alpha subunit - Nostoc punctiforme PCC
73102
Length = 1225
Score = 31.1 bits (67), Expect = 6.3
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +1
Query: 1 EVIEKHALLYLGFISLNHPPPELSSTRTRIMWNENLHKLCLNLVVALFPEKEGLL---ME 171
++I+KH LY+ I+ + E S RI + ++C + + P++E +
Sbjct: 554 QIIDKHLKLYV--INASQVARE-SGMGGRI---NTIMQVCFFALAGVLPQEEAIAKIKQA 607
Query: 172 IARIYGSSGAEAKRVVLRTIEGPIRAMVSKDLPDNEFDEDDATLRPAFRELLENCPRGAE 351
I + YG G E R+ L+ ++ + + D+P ++ P LL++ P
Sbjct: 608 IEKTYGKKGVEVVRMNLQAVDNTLGNLHKVDVPQTIKNQQSTINNP---RLLDSAPEFVR 664
Query: 352 TLL 360
+L
Sbjct: 665 EVL 667
>UniRef50_Q4SCZ9 Cluster: Chromosome 14 SCAF14646, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF14646, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 183
Score = 31.1 bits (67), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 117 LLEFSCGALPRKRRTTDGNSKDIRQLRGRSEARCTENHRG 236
L E +CGALPR+ G ++ RS +C +H G
Sbjct: 57 LSELACGALPRRAGLPSGTQSSPVRVVVRSAVKCNSSHCG 96
>UniRef50_Q3W5S7 Cluster: Similar to Glycosyltransferase; n=1;
Frankia sp. EAN1pec|Rep: Similar to Glycosyltransferase
- Frankia sp. EAN1pec
Length = 637
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 192 LRGRSEARCTENHRGSDPSDGVQGPARQRV*RGRRHAAPRLQGTARELSPRGRDSAH 362
LRGR RC G+ G P R+ V RGR+H P G +R + H
Sbjct: 502 LRGRPGIRCGRPGAGAA---GPGAPVRRAVLRGRQHRGPHRAGPSRAAAGAAAPRGH 555
>UniRef50_A5AP94 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 523
Score = 31.1 bits (67), Expect = 6.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 49 NHPPPELSSTRTRIMWNENLHKLCLNLVVALFPEKEGLLMEIARIYGSSG 198
+H +S +TRI W ++LHK + V L ++ I ++ GS G
Sbjct: 178 SHNTTSFASNKTRIRWTQDLHKRFVESVNCLGGAEKATPKGILKLMGSEG 227
>UniRef50_Q3JWW0 Cluster: Putative uncharacterized protein; n=3;
Burkholderia pseudomallei|Rep: Putative uncharacterized
protein - Burkholderia pseudomallei (strain 1710b)
Length = 1143
Score = 30.7 bits (66), Expect = 8.3
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 240 DPSDGVQGPAR--QRV*RGRRHAAPRLQGTARELSPRGRDSAH 362
DP+DG +GP R +RV R R Q AR PRG D H
Sbjct: 283 DPADGARGPRRRQRRVARDRARGHDGRQQAAR-FQPRGPDHDH 324
>UniRef50_Q3JJ67 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 827
Score = 30.7 bits (66), Expect = 8.3
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +3
Query: 150 KRRTTDGNS---KDIRQLRGR-SEARCTENHRGSDPSDGVQGPARQRV*RGRRHAAPRLQ 317
+RR DG++ +D R+ R SEA RG P AR V RG R AAPR
Sbjct: 245 RRRDLDGHAARRRDGREAVPRLSEAGADGALRGGGPGRAATANARGGVTRGARRAAPRC- 303
Query: 318 GTARELSPRG 347
++PRG
Sbjct: 304 ARCDGVAPRG 313
>UniRef50_Q5Z473 Cluster: Pr1-like protein; n=8; Oryza sativa
(japonica cultivar-group)|Rep: Pr1-like protein - Oryza
sativa subsp. japonica (Rice)
Length = 326
Score = 30.7 bits (66), Expect = 8.3
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 234 GSDPSDGVQG-PARQRV*RGRRHAAPRLQGTARELSPRGRDSAH 362
G PS V G PARQR RG R + P QG +E G +SAH
Sbjct: 285 GPHPSARVAGGPARQRRARGERPSGP--QGEEKEGEGDGPNSAH 326
>UniRef50_A7QWR3 Cluster: Chromosome chr16 scaffold_207, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_207, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 500
Score = 30.7 bits (66), Expect = 8.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 25 LYLGFISLNHPPPELSSTRTRIMWNENLHKLCLNLVV 135
+YLG SL PPP+LSS+ + + NL K L+ ++
Sbjct: 80 IYLGSNSLTGPPPQLSSSAIEVDLSNNLLKGSLSPLI 116
>UniRef50_Q61CX5 Cluster: Putative uncharacterized protein CBG12722;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12722 - Caenorhabditis
briggsae
Length = 1544
Score = 30.7 bits (66), Expect = 8.3
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +1
Query: 121 LNLVVALFPEKEGLLMEIARIYGSSGAEAKRVVLRTI 231
LN+ + L KE L++++ ++ G SG +A+ ++LR +
Sbjct: 840 LNMYLKLDLTKEQLVLQLPKVMGGSGTQAEIIILRLL 876
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,211,935
Number of Sequences: 1657284
Number of extensions: 6251491
Number of successful extensions: 17330
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17316
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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