Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0307
         (364 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   2.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   2.7  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    22   6.2  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    22   6.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   6.2  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    22   6.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   8.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   8.1  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    22   8.1  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 76  TRTRIMWNENLHKLCLNLVV 135
           +R R+ + ENL + CLN  +
Sbjct: 26  SRERVSFTENLREYCLNTTI 45


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 79  RTRIMWNENLHKLCLNLVV 135
           R R+ + ENL + CLN  +
Sbjct: 27  RERVSFTENLREYCLNTTI 45


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSQCPPGLLWNDS-QKQC 69


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +3

Query: 165 DGNSKDIRQLRGRSEARCTENHRGSDPSDGVQGPARQRV*RGRRHAAPRLQGTARELSPR 344
           D  S+ +  L+G+S  +      G     G+ GPA        R  AP  +G      P+
Sbjct: 366 DRGSEGLHGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQ 425

Query: 345 G 347
           G
Sbjct: 426 G 426


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 37  FISLNHPPPELSSTRTRIMWNENLHKLC 120
           F+  NH  P +S     ++WN++  K C
Sbjct: 43  FLICNHGTPVVSKCPPGLLWNDS-QKQC 69


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 162 TDGNSKDIRQLRGRSEARCTENHRGSD 242
           T G+ + IR++RGR +A    +  G+D
Sbjct: 468 TAGSMQMIRRVRGRDDAIPLHSINGND 494


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 255 HHRSDRTLDGSQYNALRF 202
           H RS R  DG Q N + F
Sbjct: 848 HKRSKRVKDGKQQNHVSF 865


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 255 HHRSDRTLDGSQYNALRFCPGA 190
           HH +D   D  +Y+  RF P A
Sbjct: 404 HHDADNYPDPERYDPDRFAPEA 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,701
Number of Sequences: 2352
Number of extensions: 5922
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)