Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0306
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   2.3  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    23   7.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.0  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   9.3  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 158 FPNESEKNGKCSSAEYKLEGDVVKVKN 238
           + ++ E++   ++AE+ L+ DV++V N
Sbjct: 170 YDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 131 GKLSS*SCSPVSARGRCLRE*LQQSPPQA 45
           GKLS  + S +S   +C+ E L++ PP A
Sbjct: 346 GKLSYEAVSEMSYLEQCISETLRKHPPVA 374


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 205  QTGR*RGEGQERAYHRRRQEVYRRDGQAHRRCQ*SRKANSHF 330
            Q GR     +E    RRR+E+ R   Q  RR + S+    HF
Sbjct: 1178 QNGRAVSSAEE--LERRRREMERTRRQRQRRARDSQAITIHF 1217


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 320 TVTFKFGEISRDGSVQILATDYNNYAIAYNCKYDD 424
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,603
Number of Sequences: 2352
Number of extensions: 11046
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)